| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04600 |
|---|
| Symbol | |
|---|
| ID | 8385798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 452622 |
|---|
| End bp | 453614 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644974558 |
|---|
| Product | predicted hydrolase or acyltransferase of alpha/beta superfamily |
|---|
| Protein accession | YP_003132362 |
|---|
| Protein GI | 257054530 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.374511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGTCCT ACCCCGGGGA GGGCTCGACG TTCGACGAAC CGTTCGCCGG TTCCCGCACC
GAGCGCACCT CCACCGTCGC CGCTGACGAC GGCACGCCGC TGGCGGTGGA GGAGATCGAA
CCCCGAGACG GGGGTGAGGC CGAGCTCACC GTGGTGGGTG TGCACGGCTT CGCACTGTCG
CGGCGCAGCT GGTTTGTCCA GCGACGGGAC TTCGCCGAGC TGGCGCGACC ACGGGTCAGA
CAGGTCTACT ACGACCACAG GGGACACGGA CAGTCGGCGC CGTCGGACGC CGCGCACAGC
ACCATCGAAC AACTCGCCGG GGATCTGCAC GCGGTGTTGC GGGCCGTCAC GCCGGACGGT
CCCGTGGTGC TGTTGGGGCA TTCCATGGGC GGAATGGTGA TCATGGAATT GGCGCAGATC
TGCCCGGAAC TGTTCATCGA ACGGATTCGG GGAGTCGCGC TGATCGCCAC GGCCGCGGGC
GAGATCGGCG CCCACGGCTT GCCTCGTTCG CTGCTGTCGA AGTACAACCC GCTCACCCGG
AGGGTGGGGG AGTTGGCCGA GTGGCGGCCG GGGCTCGTCG AGTTCATCCG CGCCGCCGGC
GGCCAGTTGA CGAAGGCCGC GGTCCGGCGG TTGGCGTTCG GCAGTCGCGA CGTCGATCCA
CGCCTGGTCG ACTTCATGAT CGACATGCTG CGGGAGACGC CCGTGCGGCA ATTGGCGCAT
TTCGTCGACA CACTCGGCAC CCACAACCGG TATGCGGCGC TGGCCGGGTT GAAGTACACC
GATGTGGTGG TGATCGGCGG GGACGCCGAC AGATTGACAC CGTTCGTGCA CGCCGAACGC
ATCGCCGCGG AACTGCCCGG GGCGCGGCTC GTGCGTGTGG AGGGTGCGGG GCACATGGTG
CACCTGGAGG AGCCTGAACT GGTGAACCGG CACCTCGTCG ACCTGGTGGT CCGGTGCGGT
GGGGGCGATG GAACGAGACG GAGGGACGAG TGA
|
|---|
| Protein sequence | MMSYPGEGST FDEPFAGSRT ERTSTVAADD GTPLAVEEIE PRDGGEAELT VVGVHGFALS
RRSWFVQRRD FAELARPRVR QVYYDHRGHG QSAPSDAAHS TIEQLAGDLH AVLRAVTPDG
PVVLLGHSMG GMVIMELAQI CPELFIERIR GVALIATAAG EIGAHGLPRS LLSKYNPLTR
RVGELAEWRP GLVEFIRAAG GQLTKAAVRR LAFGSRDVDP RLVDFMIDML RETPVRQLAH
FVDTLGTHNR YAALAGLKYT DVVVIGGDAD RLTPFVHAER IAAELPGARL VRVEGAGHMV
HLEEPELVNR HLVDLVVRCG GGDGTRRRDE
|
|---|
| |