Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04560 |
Symbol | |
ID | 8385794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 446460 |
End bp | 448322 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974554 |
Product | glucosamine--fructose-6-phosphate aminotransferase |
Protein accession | YP_003132358 |
Protein GI | 257054526 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0716921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCGGAA TCGTGGGATA CGTCGGGCAT CGGCAGGCAC TCGACGTGGT ACTCGGCGGG CTTCGTCGCA TGGAGTACCG CGGCTACGAC TCAGCGGGAG TCGCGGTGCT CGCAGACGAC AAGAAGCTGG TCGTCGAGCG CAAAGCGGGC CGCATAGCCA ACCTCGAAGC CGCCCTCGAC GCCACCGGCC GCGACACGTT CACCGGCACC GCGGGCATGG GCCACACCCG CTGGGCCACG CACGGCGCAC CGGTGGACCG CAACTCCCAC CCCCACCGCG ACTCCACAGG CCGGGTCGCG GTGGTGCACA ACGGCATCAT CGAGAACTTC GCCGCGCTGC GCACCGAGCT GGAGGACTCC GGCATCGAGC TGAGCAGCGA CACCGACACC GAGGTCACCG CACACCTCAT CGCCCGCGCG TACGACCACG GCGACACGGC CGGTGACCTC CCGGCCAGCG TGCGCGCGGT GTGCCGCAGG TTGGAGGGCG CGTTCACGCT GGTCGTCACC CACGCCGACC GGCCCGACCT CATCGTCGCG GCACGTCGTT CGTCACCACT CGTGGTGGGT GTGGGCAAGG ATGAGGCCTT CGTCGCCTCC GACGTGGCCG CCTTCATCGA ACACACTCGC GAGGCCGTGG AGCTCGGCCA GGACCAGCTC GTGGTGATCA GCCGCGACGG CTATGAGATC ACCGACTTCC ACGGTGTCCC CGCGGAGGGC AAGCCCTTCA CGGTCGACTG GGACCTGTCG GCCGCGGAGA AGGGCGGCCA CGAGTACTTC ATGTTCAAGG AGATCGAGGA GCAGCCCGAC GCGCTCGCCA ACACGTTGCG CGGACACTTC GAGTCCGGGC GCATCGTGCT CGACGAGCAA CGTCTGTCCG ACCAGGACCT GCGGGACGTC GACAAGGTGT TCGTCGTGGC CTGCGGTTCC GCTTACCACT CCGGTCTGGT CGCGAAGTAC GCCATCGAGC ACTGGACCCG CCTCCCGGTG GAGGTCGAGC TGGCCAGTGA GTTCCGCTAC CGCGACCCGG TGCTCGACCG GGACACGCTG GTGGTCGCCG TGTCGCAGTC GGGTGAGACG GCCGACACGT TGGAGGCCGT GCGGCACGCC AGGGAACAGA AGGCCAGGGT GCTCGCGGTG TGCAACACCA ACGGCGCGCA GATCCCCCGG GAGTCGGACG CCGTGCTGTA CACCCACGCC GGGCCCGAGA TCGGGGTCGC GTCCACGAAG GCGTTCCTCG CGCAGGTGGC GGCGAACTAC CTCGTGGGGT TGGCCCTCGC CCAGGCACGC GGCACGAAGT ACCCCGACGA GGTGGCGCGC GAGTTCGCCG AGCTCGAAGC GATGCCGTCG GCCGTCAAGT CCGTGCTGGC CACAGTGGAC CAGGTCCGTG ACCTGGGCAG GCGGATGGCC GATGCGCGCG CGGTGCTGTT CCTCGGCCGC CACGTCGGGT TCCCGGTGGC GCTGGAAGGC GCGCTGAAAC TGAAGGAACT CGCCTACATG CACGCCGAGG GGTTCGCGGC GGGCGAGTTG AAGCACGGCC CGATCGCGTT GATCGAGGAA GGGCTTCCCG TGGTGGTGGT CATGCCCTCA CCGAAGGGGC GTGCCGTGCT GCACTCCAAG ATGGTGTCCA ACATCAGCGA GATCCAGGCT CGTGGCGCCC GCACCATCGT GATCGCCGAG GAAGGTGATG AGCGGGTGCG CCCGTTCGCG GACGAGCTCG TGGAGATCCC GGCGGTGCCG ACGTTGTTGC AGCCGCTGGT GTCCACGGTG CCGCTGCAGG TGTTGGCCGC CGAGATCGCT CGCACCCGCG GCTATGACGT CGACAAACCG AGGAATCTGG CCAAGTCGGT GACGGTGGAG TAG
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Protein sequence | MCGIVGYVGH RQALDVVLGG LRRMEYRGYD SAGVAVLADD KKLVVERKAG RIANLEAALD ATGRDTFTGT AGMGHTRWAT HGAPVDRNSH PHRDSTGRVA VVHNGIIENF AALRTELEDS GIELSSDTDT EVTAHLIARA YDHGDTAGDL PASVRAVCRR LEGAFTLVVT HADRPDLIVA ARRSSPLVVG VGKDEAFVAS DVAAFIEHTR EAVELGQDQL VVISRDGYEI TDFHGVPAEG KPFTVDWDLS AAEKGGHEYF MFKEIEEQPD ALANTLRGHF ESGRIVLDEQ RLSDQDLRDV DKVFVVACGS AYHSGLVAKY AIEHWTRLPV EVELASEFRY RDPVLDRDTL VVAVSQSGET ADTLEAVRHA REQKARVLAV CNTNGAQIPR ESDAVLYTHA GPEIGVASTK AFLAQVAANY LVGLALAQAR GTKYPDEVAR EFAELEAMPS AVKSVLATVD QVRDLGRRMA DARAVLFLGR HVGFPVALEG ALKLKELAYM HAEGFAAGEL KHGPIALIEE GLPVVVVMPS PKGRAVLHSK MVSNISEIQA RGARTIVIAE EGDERVRPFA DELVEIPAVP TLLQPLVSTV PLQVLAAEIA RTRGYDVDKP RNLAKSVTVE
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