Gene Svir_04370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04370 
Symbol 
ID8385775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp423699 
End bp425093 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID644974536 
Productsecretion protein snm4 
Protein accessionYP_003132340 
Protein GI257054508 
COG category 
COG ID 
TIGRFAM ID[TIGR02958] secretion protein snm4 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.435165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACGG GCACGACGGT ATTCAGCAGG GTGACGGTGG TCGCGCCTCG AACCCGCATC 
GATGTCGCGC TGCCCGCCGA CGTGGCGGTG GCCGACCTCA TGCCCATGTT GCTGGAGATG
GCGAAGGAAG TGTCTCCCGA CGGGGGCGCC AGACACGGCG GCTGGGCACT GGCGAAGCTC
GGCGACGCTC CTCTTGATCC GAGCCGGACA CTCGCTTCTC TCGGCATCGT CGACGGCGAA
CTACTCCAAC TGCGTAAGCG CAACGAGAAT CCACCACCGC CGTTGTACGA CGACGTCGTC
GACGCCATCG CCGAAGCCGA ACCCGACAGT TTCCGGCCAT GGACGAAGGA AACAGCGCAA
CGTATTGGCC ATGTGGCGGG GGGCCTGGCG CTTTTCTGCG CCGCGCTCGC ATTGTTCTTC
GGCGGTCCCC TCTACGGCGG TAACGGACTC GCCGTGGCCA TCACCGCAGG GGTCGCCGCC
CTCGCCTGCG TCGCGGTCGG CGCCACTCTC GCCAAGGCCT ACAACGCACC CGCGACCGGA
GTGGTGATCG CAGCCGCGGG AGGGTTACCG CTGGCCTTCG TGAGCGGGTT CTACATCGTC
CCGGACGGCA CCATACGTGC CAATCTCTTG CTTGCCAGCG CGCTCGTGGT CGTCGTCGCG
GCAGCGTGCA TCCTGCTGAT GGGCGCGGGC ATCACCACAT TCATCGCGGC CGCCACTGCG
GGAGTGTTCG GTGTCATCGC GTTCCTCATC GCGACCCTCA TCGCCCACCC TGCGCCGGGC
ATCGCCGCCG GAGTCGCCGC CGCCGCTCTC GCAGGGATCT CCATGCTGCC GAGGGCCACG
ATCTGGCTGG CGAAACTGCC TCTCCCCCAC GTGCCGAGCA CCGCGGAGGA GCTGAAGGAA
GACACCGGTT ACCCGGACTA CTCCTCCATC GAACGCAAGA CCAAGGCCGC GCACAACTAC
ATGACGGGTC TGCTGATCGG CAGCGGTTCG GTCACCGCGG TCGCCGCGAT GATCACTGCG
ACCTCCGGGG ACATCTGGGG CATCCTCACC GCCGTCGTCG CCACGCTCGT CCTGTTGTTG
CGGGCACGCA CCTACGCCAA CGGCAGCCAG GCCGTCGCGC TGCTCACCAC CGGTATGGCC
TCAGCGGCCG GGATCCTGCT CGGCTGGATG TGGACCGAGG AAGCCAACGA CCGCGTCCTG
TGGGTCTTCG GCACGATCCT GCTGTTGGGA GCGGCCGCCC TGGTGCTGGG TGTCGTATTC
CCGAACCAGC GTTTCACACC CCCCATGCGG CGCGCCGTCG AGATTTTCGA AGCCGCTTGT
ATCGCAGCGG TCCTGCCGTT GGCGCTCGCG GTGATGGGCT TGTACTCCAC GCTGCGTCAT
CTCGACATCG GGTGA
 
Protein sequence
MATGTTVFSR VTVVAPRTRI DVALPADVAV ADLMPMLLEM AKEVSPDGGA RHGGWALAKL 
GDAPLDPSRT LASLGIVDGE LLQLRKRNEN PPPPLYDDVV DAIAEAEPDS FRPWTKETAQ
RIGHVAGGLA LFCAALALFF GGPLYGGNGL AVAITAGVAA LACVAVGATL AKAYNAPATG
VVIAAAGGLP LAFVSGFYIV PDGTIRANLL LASALVVVVA AACILLMGAG ITTFIAAATA
GVFGVIAFLI ATLIAHPAPG IAAGVAAAAL AGISMLPRAT IWLAKLPLPH VPSTAEELKE
DTGYPDYSSI ERKTKAAHNY MTGLLIGSGS VTAVAAMITA TSGDIWGILT AVVATLVLLL
RARTYANGSQ AVALLTTGMA SAAGILLGWM WTEEANDRVL WVFGTILLLG AAALVLGVVF
PNQRFTPPMR RAVEIFEAAC IAAVLPLALA VMGLYSTLRH LDIG