| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04250 |
|---|
| Symbol | |
|---|
| ID | 8385763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 412614 |
|---|
| End bp | 413021 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644974524 |
|---|
| Product | SSU ribosomal protein S11P |
|---|
| Protein accession | YP_003132328 |
|---|
| Protein GI | 257054496 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.333159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCGA AGTCTCGTAC GACGACCGGG ACCAAGAAGG TCCGGCGCAA GGAAAAGAAG
AACGTTGTTC ACGGGCACGC CCACATCAAG AGCACGTTCA ACAACACCAT CGTGTCCATC
ACCGACCCCA ACGGTGCGGT GATTTCGTGG GCGTCCTCCG GCCACGTCGG TTTCAAGGGC
TCTCGTAAGT CCACGCCGTT CGCTGCTCAG ATGGCCGCTG AGAACGCTGC CCGCAAGGCC
GCCGAGCACG GCATGAAGAA GGTTGACGTG TTCGTCAAGG GTCCGGGTTC CGGCCGTGAA
ACCGCGATCC GTTCACTGCA GGCCGCAGGA CTCGAGGTCG GCACCATCCA GGACGTGACC
CCGCAGCCGC ACAACGGCTG CCGTCCGCCG AAGCGGCGCC GGGTCTGA
|
|---|
| Protein sequence | MPPKSRTTTG TKKVRRKEKK NVVHGHAHIK STFNNTIVSI TDPNGAVISW ASSGHVGFKG
SRKSTPFAAQ MAAENAARKA AEHGMKKVDV FVKGPGSGRE TAIRSLQAAG LEVGTIQDVT
PQPHNGCRPP KRRRV
|
|---|
| |