Gene Svir_04230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04230 
Symbol 
ID8385761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp412032 
End bp412412 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content62% 
IMG OID644974523 
ProductSSU ribosomal protein S13P 
Protein accessionYP_003132327 
Protein GI257054495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.305446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAC TCGCTGGCGT TGACCTCCCC CGCGAGAAGC GGTTGGAGAT CGCGCTGACC 
TACATCTACG GCATCGGCCG TACCCGCTCC AAGGACATCA TCGCCGCGAC TCAGCTCAAC
CCGGACGTCC GCGTCAAGGA CCTCGGCGAC GACGACCTTG CGAAGCTGCG GGAGTTCATC
GAAGAGAACT ACAAGGTCGA AGGTGATCTT CGGCGCGAGG TAAACGCCGA CATCCGTCGG
AAGATCGAGA TCGGGTGCTA CGAGGGCCTT CGTTGGAGGC GTGGTCTGCC TGTGCGTGGT
CAGCGCACCA AGACCAACGC CCGTACCCGT AAGGGCCCGA AGAAGACGGT CGCCGGCAAG
AAGAAGGCGG GCAAGAAGTG A
 
Protein sequence
MARLAGVDLP REKRLEIALT YIYGIGRTRS KDIIAATQLN PDVRVKDLGD DDLAKLREFI 
EENYKVEGDL RREVNADIRR KIEIGCYEGL RWRRGLPVRG QRTKTNARTR KGPKKTVAGK
KKAGKK