Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04200 |
Symbol | |
ID | 8385758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 410382 |
End bp | 411161 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644974520 |
Product | methionine aminopeptidase, type I |
Protein accession | YP_003132324 |
Protein GI | 257054492 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.960695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA TCAAGACGCC CGGTGAGTTG GATGCGATGC GGGCGGCGGG TCTCGTAGTC GCGCGTACGT TGAGGCGTGT GGCTGAGGCG GCACGTCCAG GTGTCAGTAC CGCGGAGCTC GACCAGCTGG CCGAGGAGAC GATTCGGGAA GCCGGCGCGG TGCCCTCGTT CAAGGGATAT CACGGCTTTC CCGCATCGAT CTGCGCGTCG GTGAACGAGC AGATCGTGCA CGGCATCCCG GCCAAGAAGA CGGTGCTCGC AGAAGGTGAC CTGCTGTCGG TCGACTGCGG TGCGATCCTC GACGGCTGGC ACGGCGACTC GGCGATGACC ATCGAGATCG GCGAGGTATC CGAACGTGAC CGGGCGTTGT CCGCCGCGAC GAGGGCCGCG ATGGTCGCGG GTATTGAAGC GGCCGTGCCC AATGCCCGGT TGACCGACAT CTCGCATGCG ATCGAGTCCG CGGCGCGTCG GGCGAGTAGC GAGGACGGCA TCGAATACGG GATGGTGGCC GAGTACGGCG GTCATGGCAT CGGACGCGAG ATGCACATGG AGCCGTTCCT GCCGAACGTC GGTAAACCGG GTAAGGGACC GAAGCTGGCT GTCGGGATGA CGTTGGCTAT CGAACCCATG CTGACGGCGG GATCCGGGGA GACTGTGGAG CTCGACGACG GTTGGACGGT GATCACCGCC GACGGTTCCC GAGCTGCACA TTGGGAACAC ACGGTCGCTA TCACGGAGGA TGGTCCGTGG GTGCTGACGG CCCCCGAAGA CGACGTTTAG
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Protein sequence | MIEIKTPGEL DAMRAAGLVV ARTLRRVAEA ARPGVSTAEL DQLAEETIRE AGAVPSFKGY HGFPASICAS VNEQIVHGIP AKKTVLAEGD LLSVDCGAIL DGWHGDSAMT IEIGEVSERD RALSAATRAA MVAGIEAAVP NARLTDISHA IESAARRASS EDGIEYGMVA EYGGHGIGRE MHMEPFLPNV GKPGKGPKLA VGMTLAIEPM LTAGSGETVE LDDGWTVITA DGSRAAHWEH TVAITEDGPW VLTAPEDDV
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