Gene Svir_04200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04200 
Symbol 
ID8385758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp410382 
End bp411161 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID644974520 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003132324 
Protein GI257054492 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.960695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCAAGACGCC CGGTGAGTTG GATGCGATGC GGGCGGCGGG TCTCGTAGTC 
GCGCGTACGT TGAGGCGTGT GGCTGAGGCG GCACGTCCAG GTGTCAGTAC CGCGGAGCTC
GACCAGCTGG CCGAGGAGAC GATTCGGGAA GCCGGCGCGG TGCCCTCGTT CAAGGGATAT
CACGGCTTTC CCGCATCGAT CTGCGCGTCG GTGAACGAGC AGATCGTGCA CGGCATCCCG
GCCAAGAAGA CGGTGCTCGC AGAAGGTGAC CTGCTGTCGG TCGACTGCGG TGCGATCCTC
GACGGCTGGC ACGGCGACTC GGCGATGACC ATCGAGATCG GCGAGGTATC CGAACGTGAC
CGGGCGTTGT CCGCCGCGAC GAGGGCCGCG ATGGTCGCGG GTATTGAAGC GGCCGTGCCC
AATGCCCGGT TGACCGACAT CTCGCATGCG ATCGAGTCCG CGGCGCGTCG GGCGAGTAGC
GAGGACGGCA TCGAATACGG GATGGTGGCC GAGTACGGCG GTCATGGCAT CGGACGCGAG
ATGCACATGG AGCCGTTCCT GCCGAACGTC GGTAAACCGG GTAAGGGACC GAAGCTGGCT
GTCGGGATGA CGTTGGCTAT CGAACCCATG CTGACGGCGG GATCCGGGGA GACTGTGGAG
CTCGACGACG GTTGGACGGT GATCACCGCC GACGGTTCCC GAGCTGCACA TTGGGAACAC
ACGGTCGCTA TCACGGAGGA TGGTCCGTGG GTGCTGACGG CCCCCGAAGA CGACGTTTAG
 
Protein sequence
MIEIKTPGEL DAMRAAGLVV ARTLRRVAEA ARPGVSTAEL DQLAEETIRE AGAVPSFKGY 
HGFPASICAS VNEQIVHGIP AKKTVLAEGD LLSVDCGAIL DGWHGDSAMT IEIGEVSERD
RALSAATRAA MVAGIEAAVP NARLTDISHA IESAARRASS EDGIEYGMVA EYGGHGIGRE
MHMEPFLPNV GKPGKGPKLA VGMTLAIEPM LTAGSGETVE LDDGWTVITA DGSRAAHWEH
TVAITEDGPW VLTAPEDDV