Gene Svir_04170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04170 
Symbol 
ID8385755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp407663 
End bp408109 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID644974517 
ProductLSU ribosomal protein L15P 
Protein accessionYP_003132321 
Protein GI257054489 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA AGATCCACCA CCTGAAGCCT GCGCCTGGTG CCAAACGGGA GAAGATCCGC 
GTTGGTCGCG GTGAGGCTTC CAAGGGCGGT AAGACGGCGG GCCGCGGTAC GAAGGGCACT
AAGGCTCGGA AGAACGTACC TGTCGGCTTT GAGGGTGGGC AGATGCCCAT CCACATGCGG
CTTCCGAAGC TGCGTGGTTT CAACAACCGC TTCCGTACCG AGTACCAGGC GGTGAACGTG
GGCGATCTGG CCCGCGTGTT CCCTGAGGGT GGCAAGATCG GCAAGGACGA GCTCGTCGCC
CGTGGCATCG TCCACAAGGG TGAACTTGTG AAGGTGCTTG GCGACGGAGA CGTCAGCGGG
GTGAAGTTCG AACTCACCGT TGACGCGTTC TCCAAGTCCG CGAAGGAGAA GATCGAGGCC
GCTGGTGGCT CGATCACCAC GCCCTGA
 
Protein sequence
MAIKIHHLKP APGAKREKIR VGRGEASKGG KTAGRGTKGT KARKNVPVGF EGGQMPIHMR 
LPKLRGFNNR FRTEYQAVNV GDLARVFPEG GKIGKDELVA RGIVHKGELV KVLGDGDVSG
VKFELTVDAF SKSAKEKIEA AGGSITTP