Gene Svir_04080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04080 
Symbol 
ID8385746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp403918 
End bp404286 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID644974508 
ProductLSU ribosomal protein L14P 
Protein accessionYP_003132312 
Protein GI257054480 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR01067] ribosomal protein L14, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGC AGGAGTCGCG ACTGCGAGTC GCCGACAACA CGGGTGCCAA GGAGATCCTG 
ACCATCCGGG TGCTCGGTGG CTCGGGGCGG CGCTACGCGG GTATCGGTGA CATCATCGTC
GCCACCGTCA AGGACGCCAT CCCGGGCGCC AACGTGAAGC GTGGTGACAT CGTCAGGGCC
GTGATTGTCA GGACCGCGAA GGAGAAGCGT CGCCCCGACG GCTCCTACAT TCGGTTCGAC
GAGAACGCCG CGGTGCTCAT CAAGAACGAC AACGAACCGC GAGGCACACG CATCTTCGGG
CCGGTTGGCC GCGAGCTGCG CGATCGGAAG TTCATGAAGA TCATCTCGCT CGCGCCGGAG
GTGCTCTGA
 
Protein sequence
MIQQESRLRV ADNTGAKEIL TIRVLGGSGR RYAGIGDIIV ATVKDAIPGA NVKRGDIVRA 
VIVRTAKEKR RPDGSYIRFD ENAAVLIKND NEPRGTRIFG PVGRELRDRK FMKIISLAPE
VL