Gene Svir_04070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04070 
Symbol 
ID8385745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp403559 
End bp403840 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content61% 
IMG OID644974507 
ProductSSU ribosomal protein S17P 
Protein accessionYP_003132311 
Protein GI257054479 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGG CGGTGCAGAA GAAGGAATCC GGACGTAACT ACCGGAAGGT CCGCGAAGGT 
CTCGTCGTGT CCGACAAGAT GGACAAGACG ATCGTCGTGG AGCTCGAGGA CCGGAAGAAG
CATCCGCTAT ACGGCAAGGT CATGCGCACC ACCAAGAAGG TGAAGGCGCA CGACGAGCAG
AACACCGCCG GTGTGGGTGA CCGGGTCCTG CTCATGGAGA CCCGACCGCT GTCGGCCACC
AAGCGGTGGC GACTTGTCGA GATCCGTGAG AAGGCCAAGT AA
 
Protein sequence
MTEAVQKKES GRNYRKVREG LVVSDKMDKT IVVELEDRKK HPLYGKVMRT TKKVKAHDEQ 
NTAGVGDRVL LMETRPLSAT KRWRLVEIRE KAK