| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03960 |
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| Symbol | |
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| ID | 8385734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 396822 |
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| End bp | 398015 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974496 |
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| Product | translation elongation factor 1A (EF-1A/EF-Tu) |
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| Protein accession | YP_003132300 |
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| Protein GI | 257054468 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAAGG CGAAGTTCGA GCGGAGCAAG CCGCACGTCA ACATCGGGAC CATCGGTCAC
GTCGACCACG GCAAGACCAC CCTGACTGCG GCGATCACCA AGGTGCTCCA CGACAGGTAC
CCGGAGCTGA ACCAGTCGCG GGCGTTCGAC ACGATCGACA ACGCGCCCGA GGAGCGGCAG
CGCGGTATCA CGATCAACAT CTCGCACGTC GAGTACCAGA CCGAGAAGCG CCACTACGCG
CACGTCGACG CCCCGGGTCA CGCCGACTAC GTGAAGAACA TGATCACCGG TGCGGCCCAG
ATGGACGGCG CGATCCTCGT GGTCGCCGCC ACCGACGGTC CGATGCCGCA GACCCGTGAG
CACGTGTTGC TCGCGCGTCA GGTCGGCGTG CCCTACATCG TGGTGGCCCT GAACAAGGCC
GACATGGTGG ACGACGAGGA GATCCTCGAG CTCGTCGAGA TGGAGGTCCG CGAGCTGCTC
AACTCGCAGG AGTTCCCCGG CGACGACGCT CCGGTCATCC GTGTCTCCGG CCTCAAGGCG
CTTGAGGGCG ACGAGAAGTG GGCCGACAGC ATCATGGAGC TCATGAACGC TGTCGACGAG
AACGTGCCGG ACCCGGTGCG TGAGATCGAC AAGCCGTTCC TGATGCCGAT CGAGGACGTC
TTCACCATCA CCGGTCGCGG TACGGTCGTC ACCGGCCGGA TCGAGCGCGG TGAGATCCAG
CTGAACGAAG AGGTCGAGAT CGTCGGTATC CGCCCCGAGT CCCGCAAGAC CACCGTCACC
AGCATCGAGA TGTTCAACAA GATGCTGGAC TCCGGCCAGG CCGGTGACAA CGCCGCCCTG
CTGCTGCGTG GTATCAAGCG CGAGGACGTG GAGCGTGGTC AGGTTGTGAC GAAGCCTGGC
ACCACCACCC CGCACACCGA GTTCGAGGCT TCGGTGTACA TCCTGTCGAA GGACGAGGGT
GGCCGCCACA CGCCGTTCTT CAACAACTAC CGTCCGCAGT TCTACTTCCG GACCACGGAC
GTGACGGGTG TCGTGACGCT GCCTGAGGGC ACCGAGATGG TGATGCCGGG TGACAACACC
ACGATCACGG TTCAGCTGAT CCAGCCGATC GCTATGGACG AGGGCCTGCG GTTCGCCATC
CGTGAGGGTG GCCGTACCGT TGGCGCCGGC CAGGTCACCA AGATCATCAA GTAA
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| Protein sequence | MAKAKFERSK PHVNIGTIGH VDHGKTTLTA AITKVLHDRY PELNQSRAFD TIDNAPEERQ
RGITINISHV EYQTEKRHYA HVDAPGHADY VKNMITGAAQ MDGAILVVAA TDGPMPQTRE
HVLLARQVGV PYIVVALNKA DMVDDEEILE LVEMEVRELL NSQEFPGDDA PVIRVSGLKA
LEGDEKWADS IMELMNAVDE NVPDPVREID KPFLMPIEDV FTITGRGTVV TGRIERGEIQ
LNEEVEIVGI RPESRKTTVT SIEMFNKMLD SGQAGDNAAL LLRGIKREDV ERGQVVTKPG
TTTPHTEFEA SVYILSKDEG GRHTPFFNNY RPQFYFRTTD VTGVVTLPEG TEMVMPGDNT
TITVQLIQPI AMDEGLRFAI REGGRTVGAG QVTKIIK
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