Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03950 |
Symbol | |
ID | 8385733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 394448 |
End bp | 396544 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644974495 |
Product | translation elongation factor 2 (EF-2/EF-G) |
Protein accession | YP_003132299 |
Protein GI | 257054467 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCACGTG ACGTGCTGAC AGACCTCAAC AAGGTCCGAA ACATCGGCAT CATGGCCCAC ATCGACGCCG GTAAGACCAC CACCACTGAG CGGATCCTGT TCTACACCGG GATCAACTAC AAGCTCGGTG AGACCCATGA GGGTTCGGCG ACGATGGACT GGATGGAGGA GGAGCAGAAG CGGGGTATCA CTATTACCTC GGCTGCTACC ACCACCTTCT GGAACGACTA CCAGATCAAC ATCATCGACA CACCCGGCCA CGTCGACTTC ACTGTTGAGG TGGAGCGTTC GCTGCGTGTG CTCGACGGTG CCGTCGCCGT CTTCGACGGC AAGGAAGGTG TCGAGCCTCA GTCCGAGCAG GTTTGGCGGC AGGCGGACAA GTACGAGGTT CCTCGTATCT GCTTCGTCAA CAAGATGGAC AAGCTCGGCG CCGACTTCTA CTACACGGTC GGCACCATCG AGGAGCGTCT CGGCGCGCGG CCGCTCGTCG TCCAGCTGCC GATCGGCGCT GAGAGCGACT TCCAGGGTGT TGTCGATCTG GTCCGCATGA AGGCCCTCAC CTGGCGTGGT GAGACGAAGA AGGGCGAGGA CTACGAGGTC GAGGAGATCC CGGCCGATCT CGCCGACAAG GCCGCTGAAT ACCGTGAGAA GCTCGTGGAG GCCGCTGCCG AGGCCGACGA CGAGCTCATG GAGAAGTACC TCGGCGGTGA GGAGCTGACG GAGGACGAGA TCAAGTCCGC GATCCGTAAG CTCACCATCG CTCGCGAGGC GTTCCCGGTG CTGGCGGGCT CGGCGTTCAA GAACAAGGGC GTGCAGCCCA TGCTCGACGC GGTGCTCGAC TACCTGCCCT CGCCGCTCGA CGTCCCGCCG GTTGAGGGGA CGCTGCCCGA CGGTACGCCC GCCTCGCGGC CGTCGTCGGT CGATGAGCCG TTCTCCGCGC TGGTCTCGAA GGTCGCGGTG CACCCGTTCT TCGGCAAGCT GACCTACATC CGGGTCTACT CGGGCAAGGT CGCTTCCGGC ACGCAGGTCA TCAACGCGAC CAAGGAGCGC AAGGAGCGCA TCGGGAAGAT CTTCCAGATG CACTCCAACA AGGAGAACCC GGTCGACGAG GCGCAGGCCG GTCACATCTA CGCCGTGCAG GGTCTGAAGG ACACCACCAC GGGCGACACG TTGGCCGACC TGCAGAACCC GATCATCCTG GAGTCGATGA CCTTCCCTGA GCCGGTCATC AAGGTGGCCA TCGAGCCGAA GACGAAGGCC GACCAGGAGA AGCTCTCGGC GGCGATCCAG AAGCTCGCCG AGGAGGACCC GACGTTCCGG GTCAGCCAGG ATGAGGAGAC CGGCCAGACC ATCATCGAGG GCATGGGCGA GCTCCACCTC GATGTGCTCG TCAACCGGAT GAAGACCGAT TTCAAGGTCG AGGCCAACAT CGGTAAGCCC CAGGTGTCTT ACCGCGAGAC CATCCGGAAG ACGGTCGACA AGCTGGAGTA CACCCACAAG AAGCAGACCG GTGGCTCGGG TCAGTTCGCC CGTGTGGTCA TCAGGCTGGA ACCCCTGGAG ACCGCGGACG GCGCGCTCTA CGAATTCGAC AACCAGATCA CCGGTGGGCG TATCCCGAAG GAATACATCC CGTCGGTGGA CGAGGGTGCG CAGGACGCCA TGCAGTACGG CGTGCTGGCC GGCTACCCGC TTGTCGGCCT CAAGGTCACC CTGCTGGACG GTGCGTACCA CGAGGTCGAC TCCTCGGAAA TGGCCTTCAA GATCGCCGGT TCCATGGCGC TCAAGGAGGC CGCGAGGAAG GCGAATCCGA CACTGCTTGA GCCGATGATG GCGGTCGAGG TCACCACGCC CGAGGAGTAC ATGGGCGACG TCATCGGCGA CCTGAACTCC CGCCGTGGTC AGATTCAGGC CATGGAGGAG AGGTCCGGTA CGCGTGTCGT CAAGGCGCTC GTGCCTCTGT CGGAGATGTT CGGGTACGTG GGCGACCTGC GGTCGAAGAC CCAGGGTCGC GCCAACTACA CGATGGTCTT CGACTCCTAC GCGGAAGTTC CGTCGAACGT CGCGAAGGAG ATCATCGCGA AGGCGACGGG GGAGTGA
|
Protein sequence | MARDVLTDLN KVRNIGIMAH IDAGKTTTTE RILFYTGINY KLGETHEGSA TMDWMEEEQK RGITITSAAT TTFWNDYQIN IIDTPGHVDF TVEVERSLRV LDGAVAVFDG KEGVEPQSEQ VWRQADKYEV PRICFVNKMD KLGADFYYTV GTIEERLGAR PLVVQLPIGA ESDFQGVVDL VRMKALTWRG ETKKGEDYEV EEIPADLADK AAEYREKLVE AAAEADDELM EKYLGGEELT EDEIKSAIRK LTIAREAFPV LAGSAFKNKG VQPMLDAVLD YLPSPLDVPP VEGTLPDGTP ASRPSSVDEP FSALVSKVAV HPFFGKLTYI RVYSGKVASG TQVINATKER KERIGKIFQM HSNKENPVDE AQAGHIYAVQ GLKDTTTGDT LADLQNPIIL ESMTFPEPVI KVAIEPKTKA DQEKLSAAIQ KLAEEDPTFR VSQDEETGQT IIEGMGELHL DVLVNRMKTD FKVEANIGKP QVSYRETIRK TVDKLEYTHK KQTGGSGQFA RVVIRLEPLE TADGALYEFD NQITGGRIPK EYIPSVDEGA QDAMQYGVLA GYPLVGLKVT LLDGAYHEVD SSEMAFKIAG SMALKEAARK ANPTLLEPMM AVEVTTPEEY MGDVIGDLNS RRGQIQAMEE RSGTRVVKAL VPLSEMFGYV GDLRSKTQGR ANYTMVFDSY AEVPSNVAKE IIAKATGE
|
| |