Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03890 |
Symbol | |
ID | 8385727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 390016 |
End bp | 391128 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644974489 |
Product | hypothetical protein |
Protein accession | YP_003132293 |
Protein GI | 257054461 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACC CACTGGAGAG TATCGAACTC AGCAGCGAAC AGTCGTACGG CGAGAAAGTC ATGCAGGCCA TCCCTCACCA AGGCCTGTTC AGTGAAGCCA AGGGACTTTT CGAGCAAACG TTCAACGCCG CCTCCGACGG CGATTTGAGC CACGATGAAA TCTTCAATCT GGCCGTCTCG GGACAGGATT TCATCTCCTC CTGCTCGGGT GTCGCCTCCG GGATCATGCA GGACCCGATC GGCAGCATGC TCACCGGAGG TCTCGAATTC CTGATCTCCA TTTGTCAACC GTTGCAGGAT CTCGTTCACA TGGTGAGCGG CGACGGTCCC GCTCTGGAGA ACGCCGCGAC GAACTTCGCC GCAATTGGGG AGGGCATCGA GGAGTTCAGC TCCTATTTCG CCCAGGAAGC GGTAGAGGCA CTGGTCGAAT GGGAAGGGGA ATCCGCACAG GCGGCGGCAC AGAGGCTCGC CGAATTCGCC AAAGGCATCA AGGCGGTCGC CGGTGAGGCG GGGAACATCG CCGAGCTGCT CCAGATCTCC AGCATCGTCA TGAAGGTGAT CGAGGACTTC ATCATGGCGC TGCTCACCGA ACTGATCATG TGGTTGGTCA TGATCTGGGT ACCGGCCCTC GCGTCCTCAG TCGTCACGTT CGGTGGGTCG ACCGCCGCGG CGGCGAGCGC GACCGGTGTA CGCGTGGCAC AGACCACCAC GCGGGCGAGC CAACAGGTGA GTCGGCTCAG CAAACTGCTC GACAAAATCA AGAACATACT CGTGCGGGTC AAGGAGTGGC TGGCCAAACA AGGCAAAACT TTCCGCGAGG CCATGGACAG CACACGCACT CGGGTCGATA ACGCCACGAA GCGAGTCAAA AACGCAGAAG ACACCGGCGC AAAAACCAGT TGGTCCGACA GGCTCAACTC CGACCAGGGA GCGATCGGCA GTCGCGTCTC GACGGGCTTC GGGAAGAGCA TGCGCGACAC CGCAGGGCAG AACATCGCGG AACAAATGGG CAACTGGGAA GACCATTTGG AAAGCTACAA CACCGCCCAG GAGTACGATT CGATCGGCGA GGAACAGCCC AAATACAAGA CATCTGATCA GTTGAACTTC TGA
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Protein sequence | MSNPLESIEL SSEQSYGEKV MQAIPHQGLF SEAKGLFEQT FNAASDGDLS HDEIFNLAVS GQDFISSCSG VASGIMQDPI GSMLTGGLEF LISICQPLQD LVHMVSGDGP ALENAATNFA AIGEGIEEFS SYFAQEAVEA LVEWEGESAQ AAAQRLAEFA KGIKAVAGEA GNIAELLQIS SIVMKVIEDF IMALLTELIM WLVMIWVPAL ASSVVTFGGS TAAAASATGV RVAQTTTRAS QQVSRLSKLL DKIKNILVRV KEWLAKQGKT FREAMDSTRT RVDNATKRVK NAEDTGAKTS WSDRLNSDQG AIGSRVSTGF GKSMRDTAGQ NIAEQMGNWE DHLESYNTAQ EYDSIGEEQP KYKTSDQLNF
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