Gene Svir_03890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03890 
Symbol 
ID8385727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp390016 
End bp391128 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID644974489 
Producthypothetical protein 
Protein accessionYP_003132293 
Protein GI257054461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACC CACTGGAGAG TATCGAACTC AGCAGCGAAC AGTCGTACGG CGAGAAAGTC 
ATGCAGGCCA TCCCTCACCA AGGCCTGTTC AGTGAAGCCA AGGGACTTTT CGAGCAAACG
TTCAACGCCG CCTCCGACGG CGATTTGAGC CACGATGAAA TCTTCAATCT GGCCGTCTCG
GGACAGGATT TCATCTCCTC CTGCTCGGGT GTCGCCTCCG GGATCATGCA GGACCCGATC
GGCAGCATGC TCACCGGAGG TCTCGAATTC CTGATCTCCA TTTGTCAACC GTTGCAGGAT
CTCGTTCACA TGGTGAGCGG CGACGGTCCC GCTCTGGAGA ACGCCGCGAC GAACTTCGCC
GCAATTGGGG AGGGCATCGA GGAGTTCAGC TCCTATTTCG CCCAGGAAGC GGTAGAGGCA
CTGGTCGAAT GGGAAGGGGA ATCCGCACAG GCGGCGGCAC AGAGGCTCGC CGAATTCGCC
AAAGGCATCA AGGCGGTCGC CGGTGAGGCG GGGAACATCG CCGAGCTGCT CCAGATCTCC
AGCATCGTCA TGAAGGTGAT CGAGGACTTC ATCATGGCGC TGCTCACCGA ACTGATCATG
TGGTTGGTCA TGATCTGGGT ACCGGCCCTC GCGTCCTCAG TCGTCACGTT CGGTGGGTCG
ACCGCCGCGG CGGCGAGCGC GACCGGTGTA CGCGTGGCAC AGACCACCAC GCGGGCGAGC
CAACAGGTGA GTCGGCTCAG CAAACTGCTC GACAAAATCA AGAACATACT CGTGCGGGTC
AAGGAGTGGC TGGCCAAACA AGGCAAAACT TTCCGCGAGG CCATGGACAG CACACGCACT
CGGGTCGATA ACGCCACGAA GCGAGTCAAA AACGCAGAAG ACACCGGCGC AAAAACCAGT
TGGTCCGACA GGCTCAACTC CGACCAGGGA GCGATCGGCA GTCGCGTCTC GACGGGCTTC
GGGAAGAGCA TGCGCGACAC CGCAGGGCAG AACATCGCGG AACAAATGGG CAACTGGGAA
GACCATTTGG AAAGCTACAA CACCGCCCAG GAGTACGATT CGATCGGCGA GGAACAGCCC
AAATACAAGA CATCTGATCA GTTGAACTTC TGA
 
Protein sequence
MSNPLESIEL SSEQSYGEKV MQAIPHQGLF SEAKGLFEQT FNAASDGDLS HDEIFNLAVS 
GQDFISSCSG VASGIMQDPI GSMLTGGLEF LISICQPLQD LVHMVSGDGP ALENAATNFA
AIGEGIEEFS SYFAQEAVEA LVEWEGESAQ AAAQRLAEFA KGIKAVAGEA GNIAELLQIS
SIVMKVIEDF IMALLTELIM WLVMIWVPAL ASSVVTFGGS TAAAASATGV RVAQTTTRAS
QQVSRLSKLL DKIKNILVRV KEWLAKQGKT FREAMDSTRT RVDNATKRVK NAEDTGAKTS
WSDRLNSDQG AIGSRVSTGF GKSMRDTAGQ NIAEQMGNWE DHLESYNTAQ EYDSIGEEQP
KYKTSDQLNF