Gene Svir_03780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03780 
Symbol 
ID8385716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp374019 
End bp374825 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID644974478 
Producthypothetical protein 
Protein accessionYP_003132282 
Protein GI257054450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.712434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG AGGACCAGCG GCCGGAGCCG GACGACGCCG AGGACCGTCC GGCCACCGAG 
CCCGACATCG ACACCGCCGA CGAGTCTTCG GCGGAGGGAC GGTGGGCGGA CGGCTCCGGC
GCGGACGGAC CGGATGCCCC GGATGACTCG GACGCCTCGG AGAACGGGGA GAACGAGGGG
AGCGAAGAGG ACGCGGAGAC TGCGAAGAAC CCGAAGGGCG ACAAGACGGG CAGCTCGAAG
GACACGGAAG GCGAACGGCG TCCGACCCGT TCGGGGCCAC CGCGCCCGCT GTTGTTCACC
GTGGCCGCAC TCGCGTCGGC CGCACTCGTC GTCGCTATCG TGTTCGGTGT CATGTGGCGG
AACGCGGCGG GCAGCGATGA GCTGAAGATC GCCGAGGCCC GCGATGAGGT CACGGCCACG
GCGAACCGTG CCGCCGCGGT CTTCCTTGAG TTCGATCACA CCAGGAGTGA CGAGCTTCTC
GCCGAGCGGA AGAAACTCTC GACCGACGAG ATGAGCGAGG AGATCGACGA AACCGAGCAG
GAGTGGCGCG ACTCGATCGA GGAGGCCCAA CTCAAGACCG TCGCCACGGT GCAGGACGTC
GCGGTGGAGG AGCTCAACGT CCACGAGGGC AAGGCGCGGG CGTTGGCCGT GGTCCAGATC
GAGGTCACCA ACAAACAGGG CAGCTTCACC AACGTCGAGC GGCTGCAGTT GGAGTTGGAA
CGCGAGCAGC AGGGTGACGA ATCGGACGGG GACCGGCAGT GGAAGGTGTC GGCCCTGGCG
AACGTGCAGT ACGGGGCGAG TGGCTAG
 
Protein sequence
MSSEDQRPEP DDAEDRPATE PDIDTADESS AEGRWADGSG ADGPDAPDDS DASENGENEG 
SEEDAETAKN PKGDKTGSSK DTEGERRPTR SGPPRPLLFT VAALASAALV VAIVFGVMWR
NAAGSDELKI AEARDEVTAT ANRAAAVFLE FDHTRSDELL AERKKLSTDE MSEEIDETEQ
EWRDSIEEAQ LKTVATVQDV AVEELNVHEG KARALAVVQI EVTNKQGSFT NVERLQLELE
REQQGDESDG DRQWKVSALA NVQYGASG