| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03770 |
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| Symbol | |
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| ID | 8385715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 372693 |
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| End bp | 373955 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974477 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132281 |
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| Protein GI | 257054449 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTCC GCAAGACCAA GATCCAACTC GTCGCGTTCC TCGTCGTCTC GGTTCTGGCG
GTCGCGTACG CGCTCGTCCG GTTCACCGAT GTCGAGAAGA CGTTCGGTGC CGGCGGTTAC
ACGGTCCACC TCCACCTGAC TTCCTCCGGG GGGATCTTCA CGGGTGCCGA GGTCACCTAT
CGCGGTTACA ACATCGGCGA GGTGGGACGG CTCAGCCTGA CCGAGGACGG GTTGGCGGCC
GAGTTGCTCA TCGAACCCGA CACCCCTCGG GTGCCGCGTG AACTGGACGT GACCATCGCC
AACCGCTCGG CGGTGGGGGA GCAGTACGTC GATCTGCGCC CGGTCACCGA CGAAGGCCCG
TACCTCGCCG ACGGCGACGT CATCGGCCCG GAGAGGGTCA GCACCCCGGT ACCCGCCGAG
GACCTCATCA CCGACCTGGA CAGCCTCGCC TCCTCGGTGC CGACGGAGTC GTTGCGCACG
ATCGTCGACG AGTCCTATGA GGCGTTCCAC GGCACCGGGG AGCACTTGCA GAGGCTCATG
GACACCACGA GCGAGTTCAC CCGGGTCGCC AAGGAGTACC TGCCGCAGAC GGTGGAGTTG
CTCGACAAGG GCAGCACGGT CCTGCGCACC CAGAACGACC TCTCCACGTA CATGCGATCG
TTCAGCGAGG ACCTGGCGGC CTTGTCGCAG ACGCTGAAGG ACTCCGACGG CGACATCCGG
AACTTGATCG ACGTCGCGCC GGACGCGGCG ACGACGGTCA GCGGGGTGCT CGCCGAGTCC
GGTCCCGGAC TCAGCAACGT GGTCGCCAAC CTGTTGACGA CCTCCAACGT GCTCATCACC
CGACTCGACG GGGTGGAGCA GGCGTTGGTG AGTTATCCGT TGGTCGCGGC GGGCGCTTAC
AGCGTTACCC CCGGCGACGG GACCGCGCAT CTGGGGCTCG TGCTGAACCT GTTCGACCCA
CCCGCGTGCA CCAAGGGCTA CCGGCCTCCG GAGACTTATC GTCCCGGCAA CGACACGACG
CCTCGCGAGC CGTACAAGGA CGCGTACTGC GCCGAGCCGC CGGGCAGCCC CATCGCCGTG
CGGGGTTCGC AGAACGCGCC GTACAACGGC GTGCCGTCGC TGCCGACGCC CGCCCAGGTG
GAGGCCAACC GCAACCGCGA TTCCGAACAA CTGGAGTACC TGCGGCGCAT CGCGTCCGAC
TTGGCGAAGG AGGACGGACG TTCCATCTCG AGCCTGCGCG AGCTCGTCGG ATTGCCGGAC
TGA
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| Protein sequence | MLVRKTKIQL VAFLVVSVLA VAYALVRFTD VEKTFGAGGY TVHLHLTSSG GIFTGAEVTY
RGYNIGEVGR LSLTEDGLAA ELLIEPDTPR VPRELDVTIA NRSAVGEQYV DLRPVTDEGP
YLADGDVIGP ERVSTPVPAE DLITDLDSLA SSVPTESLRT IVDESYEAFH GTGEHLQRLM
DTTSEFTRVA KEYLPQTVEL LDKGSTVLRT QNDLSTYMRS FSEDLAALSQ TLKDSDGDIR
NLIDVAPDAA TTVSGVLAES GPGLSNVVAN LLTTSNVLIT RLDGVEQALV SYPLVAAGAY
SVTPGDGTAH LGLVLNLFDP PACTKGYRPP ETYRPGNDTT PREPYKDAYC AEPPGSPIAV
RGSQNAPYNG VPSLPTPAQV EANRNRDSEQ LEYLRRIASD LAKEDGRSIS SLRELVGLPD
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