| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03760 |
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| Symbol | |
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| ID | 8385714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 371497 |
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| End bp | 372693 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974476 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132280 |
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| Protein GI | 257054448 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.704534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGAT TCCGGACGAC GCTCGCCGCC GCGGGAGCGG TCATCCTCGT CGCGGCCGGC
GGTTGCAGTG ATTTCGAAGG GGTCTACGAC ATCCCGCTGC CCGGCGGCGC CGACCTGGGC
GACAACCCGT ACACCGTGCG CGTCCACTTC CCCGATGTGC TCGACCTCGT CCCTCAGGCG
GGCGTGCGGG TCAAGGAGGT GCCGGTCGGC ACGGTGCAGG ACGTCCGCCT CGCCGAGGAC
GGTTGGACCG CCGAGGTGGT GCTCGCCATC AACGGCGATG TCGAGTTACC CGCGAACGCG
ATCGCGAATC TGCGGCAGTC GAGTCTGCTC GGGGAGAAGT ACGTCGAACT CGCCGCTCCC
TCCGAGAGCG AGGGCTTCCC CGGGGAGAAG TTGTCCGACG GCGATCTCAT TCCGGTCGAA
CGCACCAACC GCAGCGTCGA GGTCGAGGAG GTCCTCGGAG CGCTGTCGAT GCTGCTCAAC
GGCGGTGGTG TCGAGCAACT CAACACGATC ACCAAGGAAC TCAACGCGGC CCTGGAAGGC
AACGCGCCCG ATGTGAAGGC GTTGCTGCGA AACGCCGAGG AACTGGTGGA GGCGCTCGAC
GAGCAGTCCA GCGACATCAC CACCGCGCTC GACCAACTCA ACCGGCTGTC GTCCACTCTG
AACGCCCAAC GCGACAAGAT CGCTGTGGCG GTCGAGGACC TCGGTCCGGG GTTGGAGGTG
CTCGAACGGC AACGTGACCA GCTCGTCGCC ATGTTGGGCG CTCTCGAAGG ACTGTCCGAT
GTGGCTGTCG AAACCGTCAA CGCCGGCCAG GAAGACCTGG TGGCCAACCT CGAAGCGCTC
TTGCCGACCT TGCGCAAGCT CAGCGAGGCG GGTGCCGACC TGCCTAACGC GCTGGAGCTG
CTGTTGACGT ATCCGTTCAC GGACGCGGCC GCCGAGGGCG TCAAGGGCGA CTACATGAAC
CTGTACATCG ATCTCGATCT GGACCTGCAG GAGATCCTCG CCAACCTCGG CCGCAGCAGG
CAGAACCCGC TGCAGAACCT GCCGATCGTC GGTGACCTCA CCAATCCCCG CGAAACCGAT
CCGGACGACA CGTCGTCGGT GCTGCCGTTG CCGGGGGACA CGGGCGGCGG GGCGGCCCCC
GGCGGACAGG GCGGCCTCGA CGGAATTCTG GACTCCATGG TCGGGGGTGG TCGCTGA
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| Protein sequence | MRRFRTTLAA AGAVILVAAG GCSDFEGVYD IPLPGGADLG DNPYTVRVHF PDVLDLVPQA
GVRVKEVPVG TVQDVRLAED GWTAEVVLAI NGDVELPANA IANLRQSSLL GEKYVELAAP
SESEGFPGEK LSDGDLIPVE RTNRSVEVEE VLGALSMLLN GGGVEQLNTI TKELNAALEG
NAPDVKALLR NAEELVEALD EQSSDITTAL DQLNRLSSTL NAQRDKIAVA VEDLGPGLEV
LERQRDQLVA MLGALEGLSD VAVETVNAGQ EDLVANLEAL LPTLRKLSEA GADLPNALEL
LLTYPFTDAA AEGVKGDYMN LYIDLDLDLQ EILANLGRSR QNPLQNLPIV GDLTNPRETD
PDDTSSVLPL PGDTGGGAAP GGQGGLDGIL DSMVGGGR
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