| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03720 |
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| Symbol | |
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| ID | 8385710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 366918 |
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| End bp | 368234 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974472 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132276 |
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| Protein GI | 257054444 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.658746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TCCGTCGCAG GTTGCTGGGC CTGCTGCTGG TGGCCATCCT CGTCGGTGGC
ATCGCGTTGA GCATCGCCGT CTACAACAGG GCGTTCACCG ACCACGTGAC CGTGCGGGTG
CAGGCCGGGG AGATCGGCAA CCAGCTCGCG CCGAACTCGG ACGTGAAGGT GCGCGGGCTG
ATCGTGGGCA GGGTCCACGC GGTCGAACCG AGTCCCACGG GCGGGGCGGA ACTCGTGCTC
CATCTGGATC CGGGACAGGC CTCGCTCGTG CCCGCCAACG TGTCGGCGCG GTTCCTGCCG
AAGACGCTGT TCGGGGAACG CTACGTCGAT CTGACCATCC CAGAGCGGCC TTCCACGACG
GGCCTGGCCG ACGGCACCGT CATCCCCCAG GACCGCACCG AGGACGCCGT GCGGTTGGAA
CAGGCCCTCG ACAACCTTCT GCCCGTGCTG CAGGCGGTGC AGCCGGAGAA ACTGTCGAGC
ACCCTGACCG CCATCTCCAA CGCTTTGGAG GGCAAAGGCG AACAACTCGG CGAAACACTG
TCCGAATTGG GTGAGTACCT CGGCGAGTTG AACCCGCACG TGCCGAAACT GCAGGAGAAC
CTGCGGGAGC TGGCCGCGTT CTCCGGCACC CTGTCCGACG TCGCACCCGA CCTCGTGCGG
ACGTTGGACA ACCTCACCAC GACGAGCCGC ACGATCGTCG AGCAGAGTCT GAACCTGGAC
ACGCTGTACC GCACGGTGGC GACCGCCTCG ACCGATTTGG ACACGTTCCT CGAAGCGAAC
GCGGCCAACC TCATCAGCCT CGGCGAGACG GCGCGCCCCA CGGCGGAGTT GCTGGCGAAG
TACGCACCCT CGTACCCGTG CTTCCTCGGT CAGATGGCGG AACTGGTGCC CAGGATCGAC
GAATCCTTCG GCAAGGGCAC CAACAAACCG GGGCTGCACA TCACCCTGGA GATCACCGTG
GACCGGGGTC CGTACAAGCC GGGTCAGGAC GAACCCGAGT ACAACGACAA GCGCGGCCCG
CGTTGTTACG ACATGGAGGA GATGCCGGAC CCGTTCCCGC AACATCCGCC GGACGGCCCG
GTGCAGGACG GCACGGTGCA CCCGGAGTCC GCGGACTCCG CGGGCAGGGG ACTGAACAAC
TCGGCCGCCG CCGGCGGGGC CGCTCCCATG GGCAATCCGG CGAACACCGG GGGCGAACAC
GCGCTCGTGG CGCAGCTCAC CGGCCCACGG GTCGGCATGG ACCCGTCCGA GGTGCCGGCA
TGGGGTTCCC TGCTGGTCGC GCCGCTGTAC CGGGGAGCGG AGGTGACGGT CGAATGA
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| Protein sequence | MATIRRRLLG LLLVAILVGG IALSIAVYNR AFTDHVTVRV QAGEIGNQLA PNSDVKVRGL
IVGRVHAVEP SPTGGAELVL HLDPGQASLV PANVSARFLP KTLFGERYVD LTIPERPSTT
GLADGTVIPQ DRTEDAVRLE QALDNLLPVL QAVQPEKLSS TLTAISNALE GKGEQLGETL
SELGEYLGEL NPHVPKLQEN LRELAAFSGT LSDVAPDLVR TLDNLTTTSR TIVEQSLNLD
TLYRTVATAS TDLDTFLEAN AANLISLGET ARPTAELLAK YAPSYPCFLG QMAELVPRID
ESFGKGTNKP GLHITLEITV DRGPYKPGQD EPEYNDKRGP RCYDMEEMPD PFPQHPPDGP
VQDGTVHPES ADSAGRGLNN SAAAGGAAPM GNPANTGGEH ALVAQLTGPR VGMDPSEVPA
WGSLLVAPLY RGAEVTVE
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