Gene Svir_03680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03680 
Symbol 
ID8385706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp363522 
End bp363917 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID644974468 
ProductLSU ribosomal protein L12P 
Protein accessionYP_003132272 
Protein GI257054440 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.770904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC TGAGCACCGA GGAACTGCTC GACGCGTTCA AGGAGATGAC GCTGCTCGAG 
CTGTCCGAGT TCGTGAAGCA GTTCGAGGAG ACCTTCGACG TCACCGCCGC TGCCCCGGCT
GCCGTCATGG CCGCCCCGGG TGCTGCCGCC GGTGGTGCGG CTGCCCCGGC CGAGGAGGAG
AAGGACGAGT TCGACGTCAT CCTCGAAAGC GCCGGTGACA AGAAGATCCA GGTCATCAAG
GTCGTGCGTG AGGTCGTCTC CGGCCTCGGC CTGAAGGAGG CCAAGGAGCT CGTCGAGAGC
GCTCCGAAGC CGATCCTGGA GAAGGCTGAC AAGGAAGCCG CCAACGCCGC CAAGGAGAAG
CTGGAGGCCG CCGGCGCCCA GGTCAGCCTC AAGTGA
 
Protein sequence
MAKLSTEELL DAFKEMTLLE LSEFVKQFEE TFDVTAAAPA AVMAAPGAAA GGAAAPAEEE 
KDEFDVILES AGDKKIQVIK VVREVVSGLG LKEAKELVES APKPILEKAD KEAANAAKEK
LEAAGAQVSL K