Gene Svir_03640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03640 
Symbol 
ID8385702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp360296 
End bp360727 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content63% 
IMG OID644974464 
ProductLSU ribosomal protein L11P 
Protein accessionYP_003132268 
Protein GI257054436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCA AGAAGAAGAA GCTTGCAGCG ATCATCAAGC TGCAGATTCA GGCGGGTGCC 
GCGAACCCGG CGCCCCCGGT CGGCCCGGCG TTGGGTCAGC ACGGCGTCAA CATCATGGAG
TTCTGCAAGG CCTACAACGC CGCGACCGAA TCGCAGCGCG GCAACGTGGT GCCGGTCGAG
ATCTCCGTCT ACGAGGACCG CTCGTTCGAC TTCAAGCTCA AGACCCCGCC CGCCGCGAAA
CTGCTGCTGA AGGCCGCCGG TGTCGAGAAG GGCAGCGGTG AGCCGCACAA GAACAAGGTC
GGCAAGGTCA GTTGGGACCA GATCCGCGAG ATCGCCGAGA CCAAGAAGGC CGATCTCAAC
GCGGTGGATC TGGACCAGGC AACCAAGATC ATCGCTGGGA CCGCTCGTTC GATGGGTATC
ACGATCGAGT GA
 
Protein sequence
MPPKKKKLAA IIKLQIQAGA ANPAPPVGPA LGQHGVNIME FCKAYNAATE SQRGNVVPVE 
ISVYEDRSFD FKLKTPPAAK LLLKAAGVEK GSGEPHKNKV GKVSWDQIRE IAETKKADLN
AVDLDQATKI IAGTARSMGI TIE