Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03380 |
Symbol | |
ID | 8385676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 337149 |
End bp | 337925 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974438 |
Product | ATPase component of Mn/Zn ABC-type transporter |
Protein accession | YP_003132246 |
Protein GI | 257054414 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.379323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.939533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGA CCTTCGGCAG CGCACCCTCC GGGACACGAC CCCACAAGAC CACGCCCGCG TTGAGCCTCG TGGACTTCAG CGCGTCCTAC GGTGGCCGGA ACGTGCTCTC GGGCGTCACC GTGGACATCC CCTCGGCGGC GTTGGCCGCG GTGGTCGGCC CGAACGGCGC CGGCAAATCG ACGCTGGTGA AAGCGGCGTT GGGGCTGGTG CCGTCGACCC AGGGGCGGGT GCGACTGCTG GGGCAGCCGT TGTCCCGGGT GCGCCGCAAG GTGGCGTACG TACCGCAGCA GGACTCGGTG ACCAAGGACT TCCCCATCAC GGCCGTGCAG GTGGTGGAGA TGGGCCGTTA TCCGCATCGG GGCTGGTGGC GGCGCCTCAC CCCCACCGAC GACGAACTGG TGGCCCAGGC GATGGAACAG GTGGGCGTGG TCGACCTCGC CGACCGTCCG ATCGACGAAT TGTCCGGAGG ACAACGACAG CGGGTGTTCC TGGCACGCGC GCTAGCCCAG CGCGCCGAGC TGGTGGTCCT GGACGAGCCG TTCACCGCCG TGGACGCTCG CACGGAGTCG GCGCTGTTGG ACGTGCTCAC GAACCTGTGC CGGGAGGGTG TCTCGGTCAT CGTCGTGCAC CACGATCTGC GCACGGTGTT GCGCAGGTTC GACCATGCCG TGTTGCTGGC CGGTGGTGTG GTGGCGGACG GACCGGTGGC CGACGTGCTC ACCGCCGAGA ACCTCGAACG CGCCTACGGC ATCGCTCCCC TGGTGCTGGA CTCATGA
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Protein sequence | MTPTFGSAPS GTRPHKTTPA LSLVDFSASY GGRNVLSGVT VDIPSAALAA VVGPNGAGKS TLVKAALGLV PSTQGRVRLL GQPLSRVRRK VAYVPQQDSV TKDFPITAVQ VVEMGRYPHR GWWRRLTPTD DELVAQAMEQ VGVVDLADRP IDELSGGQRQ RVFLARALAQ RAELVVLDEP FTAVDARTES ALLDVLTNLC REGVSVIVVH HDLRTVLRRF DHAVLLAGGV VADGPVADVL TAENLERAYG IAPLVLDS
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