Gene Svir_03370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03370 
Symbol 
ID8385675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp336262 
End bp337152 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content71% 
IMG OID644974437 
ProductABC-type Mn2+/Zn2+ transport system, permease component 
Protein accessionYP_003132245 
Protein GI257054413 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.747416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA GACTGTTGTC CGCGCTCCCG TTGTCCTATC CGGACGCGGT GGTGGTGGTC 
GGCACCGCCG TCGTCGGATT CGTGGCCGGC GCGCTCGGCC CGCTGGCGGT GCTGCGGCGC
CGGAGCATGT TCGGTGACGC CATGAGCCAC GGCACACTGA CCGGGGTCGC GGTCGCCTTC
CTGGCGACCG GCGCGAAGGT GCCGGAGACG CTGTTACTGG GGGCGACGAT CTCGGCGGCG
TTGGCGGCCT TCGCCATGAT CGCTCTCGAA CGCACGGGCA GACTCCGACC CGACGCGGCC
ATCGGGGTGG TGCTGTCGGT GTCCCTGGCC CTCGGCATCG TGCTGATCAC CCATATCTCC
GCGACGGAGA ACAGTCAGCA GTCCGGCCTG ACGGGCTACC TGTTGGGTCA GACGGCCGGA
ATGTCCGAAC GCGACATCGC CATCGCCCTG GTGCTGGGCG CGGTGGCGTT GGCCGCGGTC
ACGGTGGGGT TCCGCGTGCT ACGCAGCGCG ACCTTCGATC CGGGTTTCAC GGCGGTCGTG
GGCGTGCCGA CGTGGGCCGT GGACGCGGCG AGCACGGGGC TGTTGGCGTT GGCCGTGGTC
CTCGGCGTGC GAACGGTCGG CGCCATCCTC ATGGTGGCGC TGCTCGTGGC ACCCGTCGTG
GCGGCGCGGC AGGTGACCAA GCGGCTGTCG ACGCTGGTGC CGTTGTCGGG TCTGATGGGG
GCCGTCTGCG GTGCGCTCGG CGGCGTGCTC TCCGGCCATG CCGAACTGCC CGCGGGTCCG
GTGATCGTCC TGTTGGCCAC CGGGATCGCC CTGGTGTCCG TGGTGTTCGC GCCGCATCGC
GGAGTGCTCG CCCGCGTCCG TAAGGCCCAC CGCAAGGAGC GTTCGGCATG A
 
Protein sequence
MIERLLSALP LSYPDAVVVV GTAVVGFVAG ALGPLAVLRR RSMFGDAMSH GTLTGVAVAF 
LATGAKVPET LLLGATISAA LAAFAMIALE RTGRLRPDAA IGVVLSVSLA LGIVLITHIS
ATENSQQSGL TGYLLGQTAG MSERDIAIAL VLGAVALAAV TVGFRVLRSA TFDPGFTAVV
GVPTWAVDAA STGLLALAVV LGVRTVGAIL MVALLVAPVV AARQVTKRLS TLVPLSGLMG
AVCGALGGVL SGHAELPAGP VIVLLATGIA LVSVVFAPHR GVLARVRKAH RKERSA