Gene Svir_03340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03340 
Symbol 
ID8385672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp334049 
End bp334495 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID644974434 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003132242 
Protein GI257054410 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.672148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC TGGATCAACG CATCGTTTCG TGCCTGGTCG CCAATGCACG ATCGAGCTAC 
GCCGAGATCG GCAAGGTCGT CGGACTGTCG GCCCCCGCCG TGAAGCGCAG GGTCGACCGA
CTGCGTGAAA CCGGGGTGTT GCGTGGCTTC ACCGCCGTGG TGGACCCGGA GGCGCTCGGG
TGGGGGACGG AGGCGTTCGT CGAAGTGCAT TGCCAGGGCA ACGTCTCCCC GACGCGGATC
CGAGCCCATC TGGAACCACT GCCGGAGGTC GTCGCCGCGT ACACGGTGTC GGGCGCGGCC
GACGCGATCG TGCACCTGCG TGCCGCCGAC ATCCATCACC TGGAGGACGC GCTGGAACGC
CTGCGAGGAT TGGAGATCAT CGACCGGACG GTGTCCACCG TGGTGCTGTC GACCTTGCTG
GAACGACCAC CGACACCGGG CCGCTGA
 
Protein sequence
MNELDQRIVS CLVANARSSY AEIGKVVGLS APAVKRRVDR LRETGVLRGF TAVVDPEALG 
WGTEAFVEVH CQGNVSPTRI RAHLEPLPEV VAAYTVSGAA DAIVHLRAAD IHHLEDALER
LRGLEIIDRT VSTVVLSTLL ERPPTPGR