Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03310 |
Symbol | |
ID | 8385669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 329687 |
End bp | 330826 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974431 |
Product | hypothetical protein |
Protein accession | YP_003132239 |
Protein GI | 257054407 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTTT TCGGTCAGGT TTGGGTGTTC AGCGCGATCG CTTTCGTGCT GGGCGCTTTC CTCGCCTGGC TCTTCCTCGT TCGACCCGCG CAACGCCGCA TCGGTGAGTT GCGACGCAGA CTCGCCGAGG CGCAGAGAGC CCCCAAAGCC GCGACGTCGA CGGGGAGCGC GACATCGGGC GCCCAGAACA CATTGATCGC CCCCGCACCG GGCGGTGACA AGGACACCCC GATCGCGTCC CGTACGCGCC GTTTCGAACC CGCCGCCGAA ACGCGGTCCG AGACCGCGGC GGGCGAGGCG ACCGAACACC TCGCGCCGGG GCCTCGATGG CCTGAACAGG ACAGTCTGCG GGGGAAGACG CCCTCGACGG CGCGATCGTC CGAGTTGGAT GAGCTCGACG AGGAGTTCGC TCGGATCGAC GCCTTCCACG AGGAAGAATT GGCCGGATCG GGGGACGCGC CCTCCGGTTC CGCCGAGCCC ACCGAGTACC CCGGCGGTCA CGCCGGCCGA TTGAACGTCG ATTCCCCCGG CGACGCGGGG GACACCGGCG GCGATGCGCA CACCCGGCGG TCGACGAGCC TGTTCGATCC CGCATCGTCC TCGAACGCGT CCGCCGGGCC CGCTTCCGGC ACGCCGCCCC AGGGCGCGGC CGAGGGCACG TCGTCGACCT CCGCGTTCGG CGGTAGGCCC GACAAAAGCG CCGAACGGCC TCTGCCCGAA CGCACCACGA TGCTGCCCAA ACGTCAGCCC GGACGTTCGT CCCTTGAAAG CTTCGACCGG TCGAAGCCGA TCCAACCGTC GATGCGGCCG GTCGAACGCC GGGAGCCGCA GTCGAGGCCG GAGCGTGGTG GCTCCTTGTT CGAACCCGCC GTCGCCCCGG CTCCCGCGTC CGGCACGACA CCACCCGCAC GGGACACCTC CGCCGCCGGG TACGGGATGC CGCCCGGGCC GTTCGGTCCC GGTTCGGCCA TGCCGAAGCC CGGTGGTGAA CGGCCGTCGC CGGAGTTCAC GGTCAAGGCC AGTGTCACCG CGCTGCGTTA CTGCGTGGAG GGGTCGCCGG AATTCCCCCG CATGGTGGCG GAGGTGTGGT TCCGTTCCCC GGACGATGCC GAGCGGGTGG GTTTCCGTCC GTTGTCGTGA
|
Protein sequence | MSVFGQVWVF SAIAFVLGAF LAWLFLVRPA QRRIGELRRR LAEAQRAPKA ATSTGSATSG AQNTLIAPAP GGDKDTPIAS RTRRFEPAAE TRSETAAGEA TEHLAPGPRW PEQDSLRGKT PSTARSSELD ELDEEFARID AFHEEELAGS GDAPSGSAEP TEYPGGHAGR LNVDSPGDAG DTGGDAHTRR STSLFDPASS SNASAGPASG TPPQGAAEGT SSTSAFGGRP DKSAERPLPE RTTMLPKRQP GRSSLESFDR SKPIQPSMRP VERREPQSRP ERGGSLFEPA VAPAPASGTT PPARDTSAAG YGMPPGPFGP GSAMPKPGGE RPSPEFTVKA SVTALRYCVE GSPEFPRMVA EVWFRSPDDA ERVGFRPLS
|
| |