Gene Svir_03310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03310 
Symbol 
ID8385669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp329687 
End bp330826 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID644974431 
Producthypothetical protein 
Protein accessionYP_003132239 
Protein GI257054407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTT TCGGTCAGGT TTGGGTGTTC AGCGCGATCG CTTTCGTGCT GGGCGCTTTC 
CTCGCCTGGC TCTTCCTCGT TCGACCCGCG CAACGCCGCA TCGGTGAGTT GCGACGCAGA
CTCGCCGAGG CGCAGAGAGC CCCCAAAGCC GCGACGTCGA CGGGGAGCGC GACATCGGGC
GCCCAGAACA CATTGATCGC CCCCGCACCG GGCGGTGACA AGGACACCCC GATCGCGTCC
CGTACGCGCC GTTTCGAACC CGCCGCCGAA ACGCGGTCCG AGACCGCGGC GGGCGAGGCG
ACCGAACACC TCGCGCCGGG GCCTCGATGG CCTGAACAGG ACAGTCTGCG GGGGAAGACG
CCCTCGACGG CGCGATCGTC CGAGTTGGAT GAGCTCGACG AGGAGTTCGC TCGGATCGAC
GCCTTCCACG AGGAAGAATT GGCCGGATCG GGGGACGCGC CCTCCGGTTC CGCCGAGCCC
ACCGAGTACC CCGGCGGTCA CGCCGGCCGA TTGAACGTCG ATTCCCCCGG CGACGCGGGG
GACACCGGCG GCGATGCGCA CACCCGGCGG TCGACGAGCC TGTTCGATCC CGCATCGTCC
TCGAACGCGT CCGCCGGGCC CGCTTCCGGC ACGCCGCCCC AGGGCGCGGC CGAGGGCACG
TCGTCGACCT CCGCGTTCGG CGGTAGGCCC GACAAAAGCG CCGAACGGCC TCTGCCCGAA
CGCACCACGA TGCTGCCCAA ACGTCAGCCC GGACGTTCGT CCCTTGAAAG CTTCGACCGG
TCGAAGCCGA TCCAACCGTC GATGCGGCCG GTCGAACGCC GGGAGCCGCA GTCGAGGCCG
GAGCGTGGTG GCTCCTTGTT CGAACCCGCC GTCGCCCCGG CTCCCGCGTC CGGCACGACA
CCACCCGCAC GGGACACCTC CGCCGCCGGG TACGGGATGC CGCCCGGGCC GTTCGGTCCC
GGTTCGGCCA TGCCGAAGCC CGGTGGTGAA CGGCCGTCGC CGGAGTTCAC GGTCAAGGCC
AGTGTCACCG CGCTGCGTTA CTGCGTGGAG GGGTCGCCGG AATTCCCCCG CATGGTGGCG
GAGGTGTGGT TCCGTTCCCC GGACGATGCC GAGCGGGTGG GTTTCCGTCC GTTGTCGTGA
 
Protein sequence
MSVFGQVWVF SAIAFVLGAF LAWLFLVRPA QRRIGELRRR LAEAQRAPKA ATSTGSATSG 
AQNTLIAPAP GGDKDTPIAS RTRRFEPAAE TRSETAAGEA TEHLAPGPRW PEQDSLRGKT
PSTARSSELD ELDEEFARID AFHEEELAGS GDAPSGSAEP TEYPGGHAGR LNVDSPGDAG
DTGGDAHTRR STSLFDPASS SNASAGPASG TPPQGAAEGT SSTSAFGGRP DKSAERPLPE
RTTMLPKRQP GRSSLESFDR SKPIQPSMRP VERREPQSRP ERGGSLFEPA VAPAPASGTT
PPARDTSAAG YGMPPGPFGP GSAMPKPGGE RPSPEFTVKA SVTALRYCVE GSPEFPRMVA
EVWFRSPDDA ERVGFRPLS