| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03180 |
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| Symbol | |
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| ID | 8385656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 313123 |
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| End bp | 313884 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974418 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_003132226 |
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| Protein GI | 257054394 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.44147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG AGAAGCCGGA GACCGGCGGC GAGCTGTCGA GCGCCGAGCA CAGCGAGAAG
GGATTGCGCC CGCAGGGTTC CGAACCGGCC AAGCCCACCA AGCCGGTGGT CGCGGGGCGG
GAGCGCCGGG GCATGTTCGG TGTGTCGGGT ACCGGGGACA CCTCCGGTTA CGGCGGCCTC
CGGTTGCCCG CGTACTCACC GCCACCCGCC GAGCGGCCCT ACGGGGGTTG GTTCGACGAT
TTCGCCGACG AGTTCTACGC GGCGCTGGCG GACAACGGGA TCCCCGCTGA CGCCATCCAG
CAGGTCACGA TCGACCGCGG CGAGATCACG TTCTACGTGC AGCGTGAGTA CCTGGTGGAC
ATCTGCCGGA CGTTGCGCGA CGACGAGGGG CTGCGGTTCG AGCTCTGCAA CTCGGTGTCC
GGTGTGGACT ACGGCGTCGA CGTCCCGCAG CGTCTGCACT CCGTGTACCA CCTGACGTCG
ATGACCTATC GGCGGCGTAT CCGGTTGGAA GTCGCGGTGG ACGTGGACGA CCCGCATATT
CCGTCCATTG TGGATGTCTA TCCGACGGCC GACTGGCAGG AGCGAGAAGC CTACGACATG
TTCGGGATCA TCTACGACGG GCATCCCGCG TTGACCCGCA TCCTCATGCC CGATGACTGG
GAAGGGCATC CCCAGCGCAA GGACTACCCG CTGGGTGGAA TTCCGGTCGA GTACAAGGGT
GCGGAGATCC CGCCGCCCGA CACGCGGAGG TCCTACTCAT GA
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| Protein sequence | MPDEKPETGG ELSSAEHSEK GLRPQGSEPA KPTKPVVAGR ERRGMFGVSG TGDTSGYGGL
RLPAYSPPPA ERPYGGWFDD FADEFYAALA DNGIPADAIQ QVTIDRGEIT FYVQREYLVD
ICRTLRDDEG LRFELCNSVS GVDYGVDVPQ RLHSVYHLTS MTYRRRIRLE VAVDVDDPHI
PSIVDVYPTA DWQEREAYDM FGIIYDGHPA LTRILMPDDW EGHPQRKDYP LGGIPVEYKG
AEIPPPDTRR SYS
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