Gene Svir_03100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03100 
Symbol 
ID8385648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp304860 
End bp305783 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID644974410 
Product1,4-Dihydroxy-2-naphthoate synthase 
Protein accessionYP_003132218 
Protein GI257054386 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0447] Dihydroxynaphthoic acid synthase 
TIGRFAM ID[TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACATG CCCAGGTTTC GGAGCTGTTC GACCCCGCAG AGTGGGACGA GGTCGCTGGC 
TTCGACTTCA CCGACATCAC ATACCACCGT TCGAAAAGGA CCCGGTCCGG CAAACGCGTC
GTCCGCGTCG CCTTCGACCG GCCGGAGGTG CGCAACGCGT TCCGTCCGCA CACCGTGGAC
GAGCTGTACC GTGCGCTCGA CCACGCCCGG ATGAGCTCCG ATGTGGGTTG CGTCCTGCTC
ACCGGCAACG GACCTTCTCC GAAGGACGGC GGCTGGGCGT TCTGCTCCGG TGGTGACCAG
CGTATTCGCG GCCGGTCCGG CTATCAGTAC GCCAGCGGCG AGACGTCGGA CACCATCGAC
CCGGCCCGTG CGGGACGACT GCACATCCTC GAAGTGCAAC GTCTGATCAG ATTCATGCCG
AAGGTCGTCA TCGCGGTGGT CCCGGGATGG GCCGCGGGCG GCGGGCATTC ACTGCACGTG
GTGTGCGATC TCACGTTGGC CTCGGCCGAA CACGCCCGGT TCAAGCAGAC CGACGCCGAT
GTGGGCTCCT TCGACGGCGG CTACGGCTCC GCCTATCTGG CCCGGCAGGT CGGGCAGAAA
TTCGCGCGGG AGATCTTCTT CCTGGGCCGC GCCTACACGG CCCAGGAGGC GCATTCGATG
GGCGCGGTGA ACAAGGTCGT GCCGCACGAG CGGCTGGAGG CCGAGGCCCT GGAGTGGGCC
TGGGAGGTGC TCGGCAAGTC GCCGACGGCC CAGCGCATGC TCAAGTACGC GTTCAACCTG
ATCGACGACG GGCTCGTCGG ACAGCAGTTG TTCGCCGGGG AGACCACCCG CCTGGCCTAC
ATGCAGGACG AGGCGATCGA AGGCAGGGAC GCCTTCCTGC AGAAACGGGA ACCGGACTGG
TCGAACTACC CGTACTACTA CTGA
 
Protein sequence
MPHAQVSELF DPAEWDEVAG FDFTDITYHR SKRTRSGKRV VRVAFDRPEV RNAFRPHTVD 
ELYRALDHAR MSSDVGCVLL TGNGPSPKDG GWAFCSGGDQ RIRGRSGYQY ASGETSDTID
PARAGRLHIL EVQRLIRFMP KVVIAVVPGW AAGGGHSLHV VCDLTLASAE HARFKQTDAD
VGSFDGGYGS AYLARQVGQK FAREIFFLGR AYTAQEAHSM GAVNKVVPHE RLEAEALEWA
WEVLGKSPTA QRMLKYAFNL IDDGLVGQQL FAGETTRLAY MQDEAIEGRD AFLQKREPDW
SNYPYYY