| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03080 |
|---|
| Symbol | |
|---|
| ID | 8385646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 302942 |
|---|
| End bp | 303904 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644974408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003132216 |
|---|
| Protein GI | 257054384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC TTGCCGACTT GCTCGGCGGT TGGTGGGTGG GTGAGGTGCC CGACGCGCCA
ACCCGACCGC TCGCCGGGGT GCTGGCCGAC TTACGACGCT TCCACGAGGC GCGTAACAGC
CCTGGCCCGA AGGTGGCAGG CGACTACCCC ACACAGATTG GCACGCTGTC GCGGCTGATC
CGCGACCTAC TCGCCGCCGC AGCGGAACCA GCACACGAGC ATCGAGTGCT CGCGCCGTTG
CTGACCGCCT ACCACGTCGC GGGCAGCATC GCCATGCGCC TACGTATCCC CGGCTTGCCC
TCTCTTGCCG CCGACCGCAT GCAACAGGTC GCCGACCGGC TCGACGATCC GGTGTGGCAG
GCCGTCGCGG CGTGGGGCCG CGCTCAGTTC CTTTCCGGCG TGAACCGGGC ACGTCAGTAC
GAGCTCGCCG TCGCCGCCGC GGACATGGCA CCGGCTGATC GGCCCGAGAC ACGAGGCATG
GCCAACTTGA CCGCGGCGAT GGCCGCGGCG ACGCAGGGAG ACGCCGACCT CGCCGAGACG
CACCTTGCGG AAGCTGCCGC GATCGCCGAG CGCGTGGAGC CGGACGTGAG TCCGTGGCCG
GCTGGGGTGA TGCAGTTGGG GCGGACGAAC GTCGGTATCT TCCGCGTCAC GGTGGGGGTC
GAGCTTGGGC ACGGTGCTCG TGTCGCCGAG GTCGCCGAAG GCGTTCGGCT TGAGACGATC
TCACGCGGCC GTCAGGCGTC CTTCTGGCTC GACTACGGGC GAGGGTTGCT GACCGACCGC
GGCAGGCGAG ATGAGGGCCT TTCCGCGCTA CTGAGGGCCG AACAGCTCGC ACCACAGCAG
GTTCACACCA ATGTGTTCGC CCGTGAAGCC GTCGCGGAGC TGCAGCGGTC GTCACGACGG
GACGCCAGCG GACGGGAGGT CCGCGGCCTG GCGTGGCGCA TGGGGCTTGC CCCAACCGGG
TGA
|
|---|
| Protein sequence | MAELADLLGG WWVGEVPDAP TRPLAGVLAD LRRFHEARNS PGPKVAGDYP TQIGTLSRLI
RDLLAAAAEP AHEHRVLAPL LTAYHVAGSI AMRLRIPGLP SLAADRMQQV ADRLDDPVWQ
AVAAWGRAQF LSGVNRARQY ELAVAAADMA PADRPETRGM ANLTAAMAAA TQGDADLAET
HLAEAAAIAE RVEPDVSPWP AGVMQLGRTN VGIFRVTVGV ELGHGARVAE VAEGVRLETI
SRGRQASFWL DYGRGLLTDR GRRDEGLSAL LRAEQLAPQQ VHTNVFAREA VAELQRSSRR
DASGREVRGL AWRMGLAPTG
|
|---|
| |