Gene Svir_03030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03030 
Symbol 
ID8385641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp299601 
End bp300476 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID644974404 
Product1,4-dihydroxy-2-naphtoate prenyltransferase 
Protein accessionYP_003132212 
Protein GI257054380 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG TCGCGGAGTG GATCGAAGGG GCACGGCCCC GCACGCTGCC CAACGCCATC 
GCCCCCGTAC TGGTCGGGGT GGGCGCTGCG GCGCAATTGG ACGCCGTGTC GTGGTGGCGT
TCGCTGCTCG CGCTGCTGGT CGCGGTGGCT CTGATCATCG GCGTGAACTA CGCCAACGAC
TACTCCGACG GTGTCAGGGG CACCGACAAC GAGCGGGTGG GGCCGCTACG TCTGGTCGGT
TCCGGTGCCG CGTCCGCGAA GGCCGTGCTG GGTGCCGCGC TGGGGCTGTT CCTGCTGGCC
GCCCTGTTCG GACTGGTACT CGTACTGGCG AGCGGCCAGT GGTGGTTGCT CCTGGTCGGC
GCATCGTGCA TCGCGGGGGC CTGGTTCTAC ACCGGGGGCT CGCGCCCGTA CGGCTACGCC
GGTTTCGGCG AAGTCGCCGT GTTCGTGTTC TTCGGACTCA CGGCCGTGCT CGGCACCGTG
TACGTGCAGG CCGAGCGGGT GAGTTGGGAA GCGCTGGGCT GCGCGGTGGC CGTGGGATGC
CTGTCCGTGG CGGTGCTCGT GGCCAACAAC CTGCGCGACA TCCCCACCGA CCGCGAGGCC
GGCAAGATCA CGCTGGCGGT GCGGCTCGGC GATCGAGGTA CCCGACGGTT CTACCTGGCA
CTCGTCACCG TGCCGTTCCT CGTCACCGCG GCGCTGGCGT TCGCGCATCC CGTGACCTCG
GTGGGGCTGT TGGCGGCGCC GCTGCTTGTC ACTCCGGTGA GGGCCGTCAT GGCGGGAAAC
ACCGGCGTAC GACTCATCCC CGTGCTCCGG GACACGGGGA TGGCGATGCT CGCGTGGGCG
ATCCTCACCG GGGCCGCGCT GGCGTTCACG GGCTGA
 
Protein sequence
MATVAEWIEG ARPRTLPNAI APVLVGVGAA AQLDAVSWWR SLLALLVAVA LIIGVNYAND 
YSDGVRGTDN ERVGPLRLVG SGAASAKAVL GAALGLFLLA ALFGLVLVLA SGQWWLLLVG
ASCIAGAWFY TGGSRPYGYA GFGEVAVFVF FGLTAVLGTV YVQAERVSWE ALGCAVAVGC
LSVAVLVANN LRDIPTDREA GKITLAVRLG DRGTRRFYLA LVTVPFLVTA ALAFAHPVTS
VGLLAAPLLV TPVRAVMAGN TGVRLIPVLR DTGMAMLAWA ILTGAALAFT G