Gene Svir_03020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03020 
Symbol 
ID8385640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp298493 
End bp299557 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID644974403 
Productcysteine synthase 
Protein accessionYP_003132211 
Protein GI257054379 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.675076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG CGTGGGTGCG GAATGCCATC CGCATCATCG AGGCCGACGC CAACCGCAGC 
GCCGACACCC ACCTGCATGT CTTCCCCCTG CCTCCCGAAT GGGGCATCGA CCTGTACCTG
AAGGACGAGT CCGTACATCC CACGGGTTCG CTCAAGCACC GACTGGCCCG GTCGTTGTTG
CTGTACGGCC TGGTGAACGG GCGGATCGGC CCCGACACGG TGCTCGTGGA GGCGTCGAGC
GGGTCCACCG CGGTGTCGGA AGCGTACTTC GCCCGCATGC TCGGGCTGGA GTTCGTCACC
GTCGTGCCAC GCAACACCAG CCAGGAGAAG ATCGACCTCA TCGAGTTCTA CGGTGGTCGG
TGCCACTTCG TCGACCGGCC ACCGGACATG TACACCGAGG CCGAGCGTCT CGCCGCGGAA
TGCAACGGCC ACTATCTCGA CCAGTTCACC TATGCCGAAC GGGCCACCGA CTGGCGGGGC
AACAACAACA TCGCCGAGTC GGTGTTCACG CAACTGCGGT CGGAACGGCA CCCGATCCCG
ACGTGGATCG TGGTGGGGGC CGGCACCGGG GGAACGAGCG CGACCTTCGG GCGTTACGTG
CGTTACCGCA GGCACAACAC CCGCATCGCG GTGGTCGACC CGGAGAACTC CGCGTTCTAC
GGTGCGTGGC AGACGGGGGA GCGGGACTAC CAGACGGGTA TGCCGTCACG GATCGAGGGC
ATCGGACGTC CGAGGGTGGA ACCGTCGTTC ATCCCCGAGG TGATCGACGA GATGATCCAG
GTGCCCGACG CCGCGTCCCT GGCGGCGATC CGGTTCCTCC GGCAGCGCAC GGGTCATTGG
GCGGGCGGTT CGACCGGGAC GAACCTCTAC GGCGCCTTCA CCCTCATCTC GCGGATGTTG
GCCAACGGTG AGCGGGGCAG CGTGGTGACA CTGTTGTGCG ACGGTGGTGA ACGCTACGCC
GGGACGTACT ACAACGACGC TTGGCTCGCC GAACACGGTC TGGACATCGA ACCGTATCTG
AAGGCGTTCG ACCGCTTTCT GGAGACGGGT GTGTTCCCGG GCTGA
 
Protein sequence
MNDAWVRNAI RIIEADANRS ADTHLHVFPL PPEWGIDLYL KDESVHPTGS LKHRLARSLL 
LYGLVNGRIG PDTVLVEASS GSTAVSEAYF ARMLGLEFVT VVPRNTSQEK IDLIEFYGGR
CHFVDRPPDM YTEAERLAAE CNGHYLDQFT YAERATDWRG NNNIAESVFT QLRSERHPIP
TWIVVGAGTG GTSATFGRYV RYRRHNTRIA VVDPENSAFY GAWQTGERDY QTGMPSRIEG
IGRPRVEPSF IPEVIDEMIQ VPDAASLAAI RFLRQRTGHW AGGSTGTNLY GAFTLISRML
ANGERGSVVT LLCDGGERYA GTYYNDAWLA EHGLDIEPYL KAFDRFLETG VFPG