Gene Svir_03000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03000 
Symbol 
ID8385638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp297706 
End bp297915 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content68% 
IMG OID644974401 
ProductDNA-binding protein, excisionase family 
Protein accessionYP_003132209 
Protein GI257054377 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.17033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGA GCACTGGAGG CCGGCTACTG ACGCCGGGTG AAGTCGCCGC ACTGTTCCGA 
GTCGACCCCA AAACGGTGAC CCGCTGGGCC ACCGCGGGCC GGATCGGGTC GATTCGCACA
CCTGGGGGCC ATCGCCGATT CCGCGAATCC GAGGTCAACC AGCTCCTCGC CGAGCTGACG
ACCGACGCGA ACGAACGCCC TCGGAACTGA
 
Protein sequence
MTASTGGRLL TPGEVAALFR VDPKTVTRWA TAGRIGSIRT PGGHRRFRES EVNQLLAELT 
TDANERPRN