Gene Svir_02950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02950 
Symbol 
ID8385633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp292703 
End bp293476 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID644974396 
Productcytochrome c biogenesis protein 
Protein accessionYP_003132204 
Protein GI257054372 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0716913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCGG TATCCGAGCT GGCGGCCTCC GGGCCGTTGC TGCTCGCCGC CGGGCTGTCG 
CTGCTCGCGG GTGCGATCTC GTTCGCTTCC CCGTGTGTGG TGCCGCTCGT CCCCGGCTAC
CTCGCTTACC TCGCCGCGCT GGTCGGGGCG GAGGCGCCCG CGGTGAGCCC GGACGAGGCA
CCCAAGAAGG GACGACTCGC GGTCGTCGGT GCGGCGGGCC TGTTCGTGCT CGGCTTCACC
GTGGTGTTCA CGGCCAGTGT CGGTGGTCTG GTGTGGCTGG CCGACGCCCT GTACTTCAAC
GAGGAACTCC TGCAACGCGT CGGCGGAGTG ATCGTCATAG CGATGGCGTT CGTGTTCCTC
GGATTCATCC CCGCGTTGCA GAAGGACATC CGTTTCCGGC ATGTGCCCCG GGCCGGGTTG
TGGGGCGCGC CGGTGCTCGG TGCCGTGTTC GGCCTGGGCT GGGCGCCGTG CATCGGGCCG
ACGCTGTCCG GGGTGCTGGC GATCGCCGCG GCCAGCGGCA GTACGGGGGC GCGGGGAGTC
TTCCTGGTGT TGCTGTACTG CCTCGGCCTG GGCTTGCCGT TCCTGCTCAT CGCGGCGGGG
GCGCGTTGGG CGGTCGGTGC GGCGACGTGG TTGCGTCGGA ACAGCCGTCG GGTGCAGCTC
TTCGGTGGTG TGCTGCTGCT CGTCGTGGGC GTGCTGTTGG TGACCGGCCT GTGGACGGAT
CTGATGGGGT GGATGCGGAA CTCCGTCATC TCGGACGTGA GGTTGCCACT GTGA
 
Protein sequence
MNAVSELAAS GPLLLAAGLS LLAGAISFAS PCVVPLVPGY LAYLAALVGA EAPAVSPDEA 
PKKGRLAVVG AAGLFVLGFT VVFTASVGGL VWLADALYFN EELLQRVGGV IVIAMAFVFL
GFIPALQKDI RFRHVPRAGL WGAPVLGAVF GLGWAPCIGP TLSGVLAIAA ASGSTGARGV
FLVLLYCLGL GLPFLLIAAG ARWAVGAATW LRRNSRRVQL FGGVLLLVVG VLLVTGLWTD
LMGWMRNSVI SDVRLPL