Gene Svir_02890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02890 
Symbol 
ID8385627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp288687 
End bp289247 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID644974390 
Producthypothetical protein 
Protein accessionYP_003132198 
Protein GI257054366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0110801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.984145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAGC CAGGCGAATC GGGCGAGCAG CCCGAGCCTC GTGAGTCGGA CGACGAGCGT 
CGGGCGAGGG GGTTGCCTCC CGAGCCGACC TCCTCGGGAC AGCGTGGCGA GAAGGTGAAA 
CCACCGACAC CGGTGACGGT GTCGTTCATC CTGTACGTTC TCGCCGGGCT GGTCCTCGTG 
CTCGCGTTCG GCTACACGTT GACGCAGCAG GACCTCGTCG CCGAGACGTT GATCGACCTG 
AACACGGCCG AGAACCTCAG CGAGGAACAG ATCCGTTCGG GTGTCACGAC ACTGTTGTGG 
ACGTTGTTCG TCGGTGCCGT GGCCTTGGCG GTGTTGTTCG CGCTGTTCGG GTGGAAGGCC 
CGGCAGGGCA CGCGGTCCGC GCGCACGGTC CTCACCGTGT TGACCGCGAT CATCGTGCTG 
CTGCAGCTGT TGCTGTTCCC GACCAGCCTG CCGATGCTGG TGGCGTCCTT GCTGGCGGTG 
GCGGGCACGG TGCTGCTCTA CCTGCCGAGC GTCGCCCCCT ACTTCCCCAA ACCGCAGGGC 
TCGGGAGGGA CCCGACGCTG A
 
Protein sequence
MTEPGESGEQ PEPRESDDER RARGLPPEPT SSGQRGEKVK PPTPVTVSFI LYVLAGLVLV 
LAFGYTLTQQ DLVAETLIDL NTAENLSEEQ IRSGVTTLLW TLFVGAVALA VLFALFGWKA 
RQGTRSARTV LTVLTAIIVL LQLLLFPTSL PMLVASLLAV AGTVLLYLPS VAPYFPKPQG 
SGGTRR