Gene Svir_02880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02880 
Symbol 
ID8385626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp287705 
End bp288676 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID644974389 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_003132197 
Protein GI257054365 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0141846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCCGG AACATCGTCC TCGTCGGCTG CGCACCACCG CCGCCATGCG CCGGCTGGTG 
AGTGAGACCA CGCTGCGCCC TCGTCAGTTG ATCCTGCCCC TGTTCGTCGC CGAGGACGCG
CGGGAGCCGC GTCCCATCGG GAGCATGCCC GGTGTCGTGC AACACACCCG GGACACGTTG
CGCCGGGCCG CCGTCGAGGC GGTCGAGGCC GGGGTCGGTG GGTTGATGCT GTTCGGCGTT
CCCGCCGAGC GGGACGCCGT CGGTGGCGGG GCCACCGATG CCGACGGGAT CCTCAACGTC
GCCCTACGCG ATCTGCGGTC CGAGCTCGGC GACGCCACCG TGTTGATGGC CGACACGTGT
CTCGACGAGT TCACCGACCA CGGCCACTGC GGTGTGCTCG ACGAGTCCGG GGCGGTGGAC
AACGACGCCA CGTTGGAGCG TTACGCCGAG ATGGCGCTCG CCCAGGCCGA GGCCGGGGCG
CACATGCTCG GTCCGAGCGG GATGATGGAC GGTCAGGTCG GTGTGATCCG CCGGGCCCTC
GACGACGCCG GTTACACCGA CACCGGCATC CTCGCGTACT CGGCGAAGTA CGCCAGCGCC
TTCTACGGGC CCTTCCGTGA GGCCGTCGAC TCGCAGCTCA CCGGTGATCG GAACACCTAC
CAGCAGGATC CCGGCAACGC CAGGGAGGCG CTGCGGGAGA TCGAGCTGGA CATCGCCGAG
GGCGCCGACG CCGTGATGGT GAAGCCCGCA TTGGCGTACC TCGACGTCGT CAAGGCGGCG
GCGGAGGTGT CACCGGTACC GGTGGCGGCC TACAACATCT CCGGCGAGTA CTCGATGATC
GAAGGTGCCG CCGCCAACGG CTGGATCGAC CGTGAACGCA CGATCCTGGA GGTGCTCACC
TCGATCCGCA GGGCCGGTGC CGACCTGATC CTGACGTATT GGGCCGCTGA AGCGGCGGCT
TGGCTGGATT AA
 
Protein sequence
MFPEHRPRRL RTTAAMRRLV SETTLRPRQL ILPLFVAEDA REPRPIGSMP GVVQHTRDTL 
RRAAVEAVEA GVGGLMLFGV PAERDAVGGG ATDADGILNV ALRDLRSELG DATVLMADTC
LDEFTDHGHC GVLDESGAVD NDATLERYAE MALAQAEAGA HMLGPSGMMD GQVGVIRRAL
DDAGYTDTGI LAYSAKYASA FYGPFREAVD SQLTGDRNTY QQDPGNAREA LREIELDIAE
GADAVMVKPA LAYLDVVKAA AEVSPVPVAA YNISGEYSMI EGAAANGWID RERTILEVLT
SIRRAGADLI LTYWAAEAAA WLD