| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_02860 |
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| Symbol | hemC |
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| ID | 8385624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 285048 |
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| End bp | 285998 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974387 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003132195 |
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| Protein GI | 257054363 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.302767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTAACC CCAGTAGCAG GACCCTCCGG ATCGGCACGC GTGCCAGCAA TCTCGCGATG
TCCCAGACCC GGACGATCGC CAAGATGCTG GAGGAGGCCG GGCAGAAGGT CGAGCTCGTG
CCCGTGTCGA CGCCAGGGGA CCGGTCCTCG GCGCCGATCG CCGAGATCGG GGTCGGAGTG
TTCACTTCGG CGCTGCGTGA GGCGTTGCTG GCCAACGAGG TCGACGTCGC CGTGCATTCC
TACAAGGACC TGCCCACCGC CCCGCAGCCC GGCATCGTGC TGGCCGCGGT CTCGAAGCGG
GAGGACCCGA GGGATGTGCT CATCTCCCGG GACGGACTCA CCCTGGGTGA GTTGCCGCCC
GGTGCGAAGG TGGGCACCGG CTCGCCGCGC CGGATGACGC AGCTTCGGGC TCTCGGGCTC
GGTTTGGAGA TTGTGCCGAT CCGAGGCAAC ATTGACACCC GCATCGCCAA GGTGACCTCC
GGTGAGCTCG ACGCGATCGT GCTCGCCAAG GCGGGATTGA CCCGGGTTGG CAAGCTCGAC
CTGATCACCG AGGTCATCGA CCCGATGCAG ATTCTGCCCG CACCCGCGCA GGGTGCGCTG
GCTGTTGAGA CCCGCGTCGA CGACGTGGAC ACCGAACACC TGCTTCGGTC CATTGTGGAT
CATGAAGCGA CACGGGTGGC GGTTGCGGCC GAACGGGCGG TGCTCGCGAC ACTGCAAGCC
GGCTGCAGCG CACCCGTGGG CGCACTCGCC GAGGTCGTCG AGGATCTGGA CAGCGAAGGG
GCTGTGGTCG AACGTCTTTC GCTGCGGGGC GTCGCCGCCA CCGCGACGGA GGGCGACTCC
GTGCAGATCC TCAGGGCGTC GGGGGTGGCC GACAAGCATG AAGCCGACAG GCTCGGCCGC
ACGGTGGCTT CCGAGTTGCT CGACCTCGGT GCCGGTGCCC TGTCGCGCTG A
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| Protein sequence | MTNPSSRTLR IGTRASNLAM SQTRTIAKML EEAGQKVELV PVSTPGDRSS APIAEIGVGV
FTSALREALL ANEVDVAVHS YKDLPTAPQP GIVLAAVSKR EDPRDVLISR DGLTLGELPP
GAKVGTGSPR RMTQLRALGL GLEIVPIRGN IDTRIAKVTS GELDAIVLAK AGLTRVGKLD
LITEVIDPMQ ILPAPAQGAL AVETRVDDVD TEHLLRSIVD HEATRVAVAA ERAVLATLQA
GCSAPVGALA EVVEDLDSEG AVVERLSLRG VAATATEGDS VQILRASGVA DKHEADRLGR
TVASELLDLG AGALSR
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