Gene Svir_02850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02850 
SymbolhemA 
ID8385623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp283724 
End bp285055 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content70% 
IMG OID644974386 
Productglutamyl-tRNA reductase 
Protein accessionYP_003132194 
Protein GI257054362 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.766325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC TGGCGATCGG ATTGTCACAT CGCACCGCGG ATCTCGCCAC ATTGGAGCGC 
GTCGCCGTGC CCGCCGCCGA AGTGGGCAAG GTGCTGCACG AGTTGCAGCA GGCGGACGAC
GTGTCCGAGG TCATGCTGCT GTCGACGTGC AACCGCATCG AGGTCTACGC CGTCGTGGAG
ACCTTCCACG GCGGGCTGGC GAGCATCGCC GACGTCCTCG CCCGGCAGGC GGGGATGGAG
ACGGCGGAGC TGTACGACCA CTTCTACGTC CATTACGCCG GTGCCGCGGT GGAGCACGTG
TTCTCCGTGG CCTCCGGGCT GGACTCGATG GTCGTCGGTG AGACGCAGAT CCTCGGCCAG
GTGCGGACCG CGTACGCGAC GGCACGGGAG ACGGGCACCG TCGGCAGCAC GTTGCACGAG
CTGATCCAGA CGACGCTGCG GGTGGGCAAA CGTGTGCACA CCGAGACCGG CCTGGACCGA
CTCGGCGCGT CGGTGGTGTC CGAGGCGTTG GCCGCCGCCG GGGAGCTGTC CGGTCGGCGG
GCGCTCGTGG TCGGCGCGGG CTCGATGGGT GCGTTGGCGA CCTCCCAACT GCGCAAGGGG
GGCATCGCCG AGATCGTCGT CATCAACCGC ACCCCTGAGC GGGCCGCCCG ACTGGTCTCC
TCGCTCACCG AGCAGGGGGT GACCGCGAAG GCCGCGCCGA TGGCCGAGCT GGCCGACGAG
GTGGCGCGTG CCGATGTCGT CGTCGTCTGC ACCGGGGCCA AGAACGCGGT GCTCGGCACG
GAGCACGTCG CTCCCCGTGC CGATCGGCCC GTGGTGGTCT GCGACCTCGG GCTACCGAGG
GACGTCGAAC CCGAGGTCGG TTCCGTGCCC GGCGTCACGC TGGTCGATCT GGAGACGGTG
CGGAAGCGGA TGGCCGAGTC CGGTACCGCC ACCACGGACA AACAGCTCGC CAAGGCGTCC
GGCATCATCC TCGACGAAGT ACGCGCATAC CTGGCGGGCC AGCGCAGCGC CGCCGTCACA
CCGACCGTGA CGGCGCTGCG GAAACGGGCC GCCGAAGTGG TCGACGCCGA GCTGCTCCGC
CTCGACAGGC GGCTGCCGGA CCTCGACGCC GACGTCCGTG ACGAACTGGG CCGCACCGTG
CGGCGCGTCG TGGACAAATT GCTGCACACG CCGACCGTGC GGGTCAAACA ACTCGCCGCC
GAGAAGTCGG GCACCGACTA CGCGAACGCC CTGCGGGAGC TGTTCGGGCT GGATCCGCAG
GTGCCCACGG TGGTGTCGAG CCCCTCGGCG GCTTCCCAAC ACGATCAGAT CGACGGTGAC
CATAGTGACT AA
 
Protein sequence
MSILAIGLSH RTADLATLER VAVPAAEVGK VLHELQQADD VSEVMLLSTC NRIEVYAVVE 
TFHGGLASIA DVLARQAGME TAELYDHFYV HYAGAAVEHV FSVASGLDSM VVGETQILGQ
VRTAYATARE TGTVGSTLHE LIQTTLRVGK RVHTETGLDR LGASVVSEAL AAAGELSGRR
ALVVGAGSMG ALATSQLRKG GIAEIVVINR TPERAARLVS SLTEQGVTAK AAPMAELADE
VARADVVVVC TGAKNAVLGT EHVAPRADRP VVVCDLGLPR DVEPEVGSVP GVTLVDLETV
RKRMAESGTA TTDKQLAKAS GIILDEVRAY LAGQRSAAVT PTVTALRKRA AEVVDAELLR
LDRRLPDLDA DVRDELGRTV RRVVDKLLHT PTVRVKQLAA EKSGTDYANA LRELFGLDPQ
VPTVVSSPSA ASQHDQIDGD HSD