Gene Svir_02780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02780 
Symbol 
ID8385616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp276597 
End bp277523 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID644974379 
Product1-acyl-sn-glycerol-3-phosphate acyltransferase 
Protein accessionYP_003132187 
Protein GI257054355 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCAC TGTCCGCGGT GAATACGCAC GGCGAACCGA ACACGGGGGC GAATGTGGTG 
CCGTTTCCCG GCCGCGGCGG CGGACCCGAG CGGGGCGAAG GCCCTTCGGG GCTCATCGAT
TTCGTGCGTC GTCGACTCAC GGGCGACTAC CGGGTGGACG AGTTCGGATT CGACCCCGAA
CTCACCGAGA CCGTGTTGCT ACCGCTGCTG CGCCCCCTCT ACGAGCGATG GTTCCGCGTC
AGCACCCATG GTCTGGACAA CATCCCCGCC GAGGGCGGCG CGCTGTTGGT GTCGAACCAC
TCGGGGGTCC TGCCGTTCGA CGCCGTGATG ACGGCCGTCG CCATCCACGA CGAGCATCCC
GCCCACCGAT TCCTGCGGAT GCTCGGCGCC GACCTCGTGT TCGACACCCC GATACTCGGT
TCACTGGCGC GTAAGACGGG GCAGACGTTG GCGTGCCACC CCGACGCCGA GCGGTTGCTG
CGCAACGGCG AGCTGGTGGG CGTGTGGCCG GAGGGGTTCA AGGGCATCGG CAAACCGTTT
TCGGCACGGT ACAAACTGCA ACGTTTCGGG CGTGGGGGAT TCGTGTCGGC GGCGTTGCGG
ACCGGGGTGC CGATCATCCC ATGCGCCGTC GTGGGGGCCG AGGAGATCTA CCCCAAGATC
GGGGACATCC AACCGTTGGC ACGACTGCTG CGTCTGCCTT ATTTCCCGGT CACGCCGTTC
TTCCCGGTGT TGGGTCCGTT GGGGACGATT CCGCTGCCGA CCAAATGGCA TATCGAGTTC
GGACAACCCA TCCGCACCGA CGACTACGCC GTCGACGCCT CCGATGATCA GATGCTGGTG
CTGACCCTCA CCGACCAGGT GCGCGAGAGC ATCCAGAACC TGCTGTACCG ACGACTGGCC
CGCCGCCGGG GCGTGTTCAC CGGCTGA
 
Protein sequence
MVPLSAVNTH GEPNTGANVV PFPGRGGGPE RGEGPSGLID FVRRRLTGDY RVDEFGFDPE 
LTETVLLPLL RPLYERWFRV STHGLDNIPA EGGALLVSNH SGVLPFDAVM TAVAIHDEHP
AHRFLRMLGA DLVFDTPILG SLARKTGQTL ACHPDAERLL RNGELVGVWP EGFKGIGKPF
SARYKLQRFG RGGFVSAALR TGVPIIPCAV VGAEEIYPKI GDIQPLARLL RLPYFPVTPF
FPVLGPLGTI PLPTKWHIEF GQPIRTDDYA VDASDDQMLV LTLTDQVRES IQNLLYRRLA
RRRGVFTG