Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02720 |
Symbol | |
ID | 8385610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 271299 |
End bp | 272099 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974373 |
Product | sugar phosphate isomerase/epimerase |
Protein accession | YP_003132181 |
Protein GI | 257054349 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGGTC CGGAGATCGC GGTTACGCTT TCCACGGCCT CGGTGTGGCC GCTGCGTGCG AGGAGTGCCT TCGAACTGGC TGCGGACCTC GGTTACGACG GGGTCGAGGT GATGGTGTGG GTCGACCCGG ACAGCCAGGA CGTGGGGGCG TTGCGGCAGT ACAGCAAGAC CACGGGGGTT CCCGTGCGGT CGGTGCACTC GCCTTCGCTG CTCATCACGC AGCGCGTGTG GTCGCCGGAC CCCGTCGTGC GGCTGCGACG CTCAGTGGAA GCCGCGTTGG AGTTGGAGGC CAGCACGGTG GTCGTGCACC CGCCGTTCCG CTGGCAACGC CGCTACGGCG CCGCTTTCAG TGATCTGCTG GCCGAATTGG AGCAGGAAAG CGGAGTGGCC CTCGCGGTGG AGAACATGTT CAAAGTGCGT CCGCCCGGCG GTGGTCGCAA CGTGCGGGTG TCGGCGTTCC GCCCGTCCAT CGATCCGACC GACGTCGGCT ACGCGCATTA CACGCTCGAC CTGTCGCACA CGGCCGCCGC CGGTATGGAC GCGTTGGCGC TCGCCGATCG CATGGGGGAC GGACTGTCGC ACGTCCACCT GGCCGACGGC ACGGGTGCAC CCCGGGACGA ACATCTGGTC CCCGGCCGGG GCAATCAACC GTGTGCCGAA TTGTTGGAGC GGCTGGTGGA ACGGAATTAC CGGGGCAGCG TGGTGCTGGA GGTCAACACG CGGGCGGCCA AGTACGCCGC GCGTAGGGTG GCCGATCTCG CCGAGGCGTT GTTGTTCACT CGGTTGCATC TCGGTCAGTG A
|
Protein sequence | MAGPEIAVTL STASVWPLRA RSAFELAADL GYDGVEVMVW VDPDSQDVGA LRQYSKTTGV PVRSVHSPSL LITQRVWSPD PVVRLRRSVE AALELEASTV VVHPPFRWQR RYGAAFSDLL AELEQESGVA LAVENMFKVR PPGGGRNVRV SAFRPSIDPT DVGYAHYTLD LSHTAAAGMD ALALADRMGD GLSHVHLADG TGAPRDEHLV PGRGNQPCAE LLERLVERNY RGSVVLEVNT RAAKYAARRV ADLAEALLFT RLHLGQ
|
| |