Gene Svir_02590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02590 
Symbol 
ID8385597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp257986 
End bp258894 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID644974360 
ProductABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 
Protein accessionYP_003132168 
Protein GI257054336 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.225702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG AAGGGCAGGT ACGCGTGACT GGGAAGAACA GCAGCGACGG GGGTGCGGGA 
AGCAGGCTCC GCGCCGAGGG CCTCACCCTC GCCTACGACG ACAGCGTGGT GGTCCGCGAC
CTCGGGGTCG CCGTGCCGGA CGGGTCGTTC ACCGTGATCG TGGGGCCGAA CGCCTGCGGT
AAATCGACGT TGCTCAAGGC ACTCGCCCGG ATGTTGAGAC CGACCACGGG CGCGGTGTAC
CTCGACGGGC AGATCATCAC CAGTTATCGC TCGCGCGAGG TGGCGCGGCG GCTCGGCCTG
CTGCCGCAAA GTTCCATCGC GCCCAACGGC ATCACCGTCG GTGACCTGGT GGCCCGGGGC
CGGTACCCCC ATCAGAAACT GTTGCGACAG TGGTCGTCGG AGGACGAGGC CGTGGTGGTG
GAGGCCATGC GCCGCACGGG CGTGGCCGAC CTCGCCGACC GCCTCGTCGA CGAACTCTCC
GGCGGACAGC GGCAGCGGGT GTGGCTGGCG ATGGTGCTCG CGCAACAGAC CCCCATCCTG
CTGCTCGACG AGCCGACCAC GTTCCTCGAC ATCGCGCATC AGATCGAGGT GCTGGAGCTG
TGCGCCGACC TCAACGCCGA TTCCGGACAC ACCCTGGTGG CGGTGCTGCA CGACCTGAAC
CAGGCGTGCC GCTACGCCAC GAACCTGATC GTGCTCGCAC CGGGTGGGCG TATCGCCGCG
CAGGGCGATC CACGCGAGAT CGTCACGGCC GAGTTGATCG CCGACGTGTT CGGGCTGCCC
TGCCGCGTCA TGGACGACCC CGAGACGGGC ACGCCGATGA TCGTGCCCGC CGCGCGACGC
CGTCCGGATT CGCGGGGACG CTCAGAAGAC CACGGTGCGG TTGCCGTGCA CGAGCACGCG
CCTCTCTAG
 
Protein sequence
MAREGQVRVT GKNSSDGGAG SRLRAEGLTL AYDDSVVVRD LGVAVPDGSF TVIVGPNACG 
KSTLLKALAR MLRPTTGAVY LDGQIITSYR SREVARRLGL LPQSSIAPNG ITVGDLVARG
RYPHQKLLRQ WSSEDEAVVV EAMRRTGVAD LADRLVDELS GGQRQRVWLA MVLAQQTPIL
LLDEPTTFLD IAHQIEVLEL CADLNADSGH TLVAVLHDLN QACRYATNLI VLAPGGRIAA
QGDPREIVTA ELIADVFGLP CRVMDDPETG TPMIVPAARR RPDSRGRSED HGAVAVHEHA
PL