Gene Svir_02580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02580 
Symbol 
ID8385596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp256916 
End bp258013 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content70% 
IMG OID644974359 
ProductABC-type enterobactin transport system, permease component 
Protein accessionYP_003132167 
Protein GI257054335 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.549051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG ACACCACGAC CCGGTCCTCG ACCCGGCCCT CGGCACCGCG GCCCGTCACC 
GGCACGGTGC TGCGGACCCG GCGCGAGACC ATCGCCCTGC GCGTGGACCC CCGAGCCGTG
CTCGTGGGTT CGGTGCTGAC GTTCGCCCTG CTCGTCACGA TGGCGATCAC GCTGACCACG
GGCGAGTACG AGCTGTCCGT GTCGGAGGTC CTCGCCGCGG TGATCGGGCA GGGCGAGGGC
GCCGCCGACT TCATCGTCAA CACGTTGCGG CTGCCCCGAC TGCTCACGGC GCTGTTCGTG
GGCGCGGCGC TGGCGGTCAG CGGCGCGATC CTGCAAAGCC TCACCCGCAA CCCGCTCGGC
AGCCCGGATT TCGTCGGTTT CACCAACGGC GCCTCCACCG GTGCCCTACT GGTGATCATC
GCCGTCGGCG GGACCATGAC GCAGGTCGCG GTCGGTGCGC TGCTCGGCGG CATCGTGACG
TCGGTGCTCG TCTACCTGCT GTCGTACCGG CGGGGAGTAC AGGGCTACCG GTTCGTGCTC
ATGGGCGTCG GCGTCAACGC GTTGGCCCTG TCCGTGAACT CCTATCTGAT CACCAGGGCG
GACATCTACG ACGCGGTGAG CGCCCAAGCG TGGCTGGTGG GCAGCGTGAA CGGCCGCGAC
TGGGACCACG TCGCCGTCTC CGGACTGGCC CTGGCGATCC TCCTGCCGTT GGCGGCCAGC
CAGATCCGTG CGCTGTCGAT GCTCGAACTG GGCGATCACA CGGCCACCGC ACTCGGGGTC
GGGGTGCAGC GCAGCAGGGC CATCCTCATC GTGGCGAGCG TGCTGCTGTC GGGTTTCGCC
ACCGCCGCCG CGGGACCGAT CTGGTTCGTC GCGCTCGCCG CGCCGCAGCT CGCCCGGAGG
TTGACGCGTT CGCCGAATCC GGGGCTGGTC ACGTCGGCCC TGATGGGCGG ATTGCTGCTC
ACGGTGAGCG ACCTGGCGAT GCAACGACTG TTCCCCGCCG CGCAACTACC CGTGGGCACG
GCCACGGGGT GCCTCGGCGG GCTGTACCTG ATGTGGCTGT TGGCGTCCGA ATGGCGCGGG
AAGGGCAGGT ACGCGTGA
 
Protein sequence
MSDDTTTRSS TRPSAPRPVT GTVLRTRRET IALRVDPRAV LVGSVLTFAL LVTMAITLTT 
GEYELSVSEV LAAVIGQGEG AADFIVNTLR LPRLLTALFV GAALAVSGAI LQSLTRNPLG
SPDFVGFTNG ASTGALLVII AVGGTMTQVA VGALLGGIVT SVLVYLLSYR RGVQGYRFVL
MGVGVNALAL SVNSYLITRA DIYDAVSAQA WLVGSVNGRD WDHVAVSGLA LAILLPLAAS
QIRALSMLEL GDHTATALGV GVQRSRAILI VASVLLSGFA TAAAGPIWFV ALAAPQLARR
LTRSPNPGLV TSALMGGLLL TVSDLAMQRL FPAAQLPVGT ATGCLGGLYL MWLLASEWRG
KGRYA