Gene Svir_02460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02460 
Symbol 
ID8385584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp248016 
End bp248417 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content68% 
IMG OID644974347 
Producthypothetical protein 
Protein accessionYP_003132155 
Protein GI257054323 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.583126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTGTC CCAAGTGCCA GAACGTGATG ACGACGGTGG ACAAGAACGG CATCCACATC 
GAGCAGTGCG GTGGTTGCCG GGGCATCTTC TTGGACCGGG GCGAACTCGA ACAGATCGTG
CGCGCGGAGA ACTCCTACTA CGGTTCCGCG CCTCCGCCGC CCTACAGTCC GACCACCCAA
CCGCCGCCGC CACCGCCGCC TCCCGCGCTG CACGCCGCGC CCGCACCCAC CCAGCACTAC
GGCCAGCCCC CCTACTACGG GGACTCGCCG AAGCCCTACC GGGGCGGCGG CTACTACGGC
GATTCGCCCA GGCCCTACCA GGGCGGTTAT TACGGGGACT CGCCGAGGCC GTACGGCGGG
TACCGACGCA GGCGCAGTTT CCTGGAGAGT CTGTTCGACT GA
 
Protein sequence
MICPKCQNVM TTVDKNGIHI EQCGGCRGIF LDRGELEQIV RAENSYYGSA PPPPYSPTTQ 
PPPPPPPPAL HAAPAPTQHY GQPPYYGDSP KPYRGGGYYG DSPRPYQGGY YGDSPRPYGG
YRRRRSFLES LFD