Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02430 |
Symbol | |
ID | 8385581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 244748 |
End bp | 245272 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974344 |
Product | transcriptional regulator, PadR family |
Protein accession | YP_003132152 |
Protein GI | 257054320 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.467679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCG GACACACGTT GTTGGGGTTG CTCGAAACCG GCCCCCGACA CGGATACGAC CTCAAACGGG TCTACGACGA GCGCTTCGGC AAGGACCGGC CCCTGCACTA CGGCCAGGTG TACTCCACGC TCGCGCGCCT GCTGCGCAAC GGACTGATCA CCGAAGTCGG CGCCGAACCC GGACAGGGAC CCGAGCGCAA GAGCTACGCG ATCACGGACG CGGGCGTCAG CGACGTCGAC CAGTGGTTGT CCACACCGGA GAAACCCGAG CCGTACCTGC ACAGCACCCT CTACACGAAG GTGGTGCTCG CGCTGCTGTC CGGCCGGGAC GCCGAACTGA TCCTGGACAC GCAACGTCGG GCGCATCTGG CGGCCATGCG CGAGCTGACC CGACGCAAGA CCGAGGGTGA CCTCGCCGAT GCGCTGATCT GCGACCACGC GCTGTTCCAC CTGGAGGCCG ACCTGCGGTG GCTGGAACTC ACCGCGGCCC GGTTGGGGGA GTTGGCGGGG ACGGTGACGT CGTGA
|
Protein sequence | MSIGHTLLGL LETGPRHGYD LKRVYDERFG KDRPLHYGQV YSTLARLLRN GLITEVGAEP GQGPERKSYA ITDAGVSDVD QWLSTPEKPE PYLHSTLYTK VVLALLSGRD AELILDTQRR AHLAAMRELT RRKTEGDLAD ALICDHALFH LEADLRWLEL TAARLGELAG TVTS
|
| |