Gene Svir_02430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02430 
Symbol 
ID8385581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp244748 
End bp245272 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID644974344 
Producttranscriptional regulator, PadR family 
Protein accessionYP_003132152 
Protein GI257054320 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.467679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG GACACACGTT GTTGGGGTTG CTCGAAACCG GCCCCCGACA CGGATACGAC 
CTCAAACGGG TCTACGACGA GCGCTTCGGC AAGGACCGGC CCCTGCACTA CGGCCAGGTG
TACTCCACGC TCGCGCGCCT GCTGCGCAAC GGACTGATCA CCGAAGTCGG CGCCGAACCC
GGACAGGGAC CCGAGCGCAA GAGCTACGCG ATCACGGACG CGGGCGTCAG CGACGTCGAC
CAGTGGTTGT CCACACCGGA GAAACCCGAG CCGTACCTGC ACAGCACCCT CTACACGAAG
GTGGTGCTCG CGCTGCTGTC CGGCCGGGAC GCCGAACTGA TCCTGGACAC GCAACGTCGG
GCGCATCTGG CGGCCATGCG CGAGCTGACC CGACGCAAGA CCGAGGGTGA CCTCGCCGAT
GCGCTGATCT GCGACCACGC GCTGTTCCAC CTGGAGGCCG ACCTGCGGTG GCTGGAACTC
ACCGCGGCCC GGTTGGGGGA GTTGGCGGGG ACGGTGACGT CGTGA
 
Protein sequence
MSIGHTLLGL LETGPRHGYD LKRVYDERFG KDRPLHYGQV YSTLARLLRN GLITEVGAEP 
GQGPERKSYA ITDAGVSDVD QWLSTPEKPE PYLHSTLYTK VVLALLSGRD AELILDTQRR
AHLAAMRELT RRKTEGDLAD ALICDHALFH LEADLRWLEL TAARLGELAG TVTS