Gene Svir_02310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02310 
Symbol 
ID8385569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp232388 
End bp233527 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID644974332 
ProductFAD/FMN-dependent dehydrogenase 
Protein accessionYP_003132140 
Protein GI257054308 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.165714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.900052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGG CGACCTCGAC CCCCTCGACT CCCCCGACCG TGCTCGCTCC CGCCGATCTC 
CGCGAAGCCC ACGAAGCCCT GGCCGACACG CACGGCCCCG TGGACATCCG CGGTTCCGGG
ACCGCGACGC ACTGGGCCGA TCCACCGCGT CCCGCCACCA CCGTGCTGGA CACCACCCGG
ATGACGGGCG TACTCACCTA CAACCCCGCG GACATGACCG TCTCCGTCCG AGCGGGCACA
CCGCTGCGGG AGCTCGCGGC GGAACTCGCC CCGAACGGAC AACGTGTGGC GTTCGACCCG
GCCAGGGTGG AGCAGGGCGC CACGATCGGC GGACTCATCG CGACAGCCGA CTCCGGTCCG
CTGTCTTTGA CCTACGGTTC CCTCAGAGAC CTCGTGATCG GCGCGACGGT GGTACTCGCC
GACGGCACGG TGGCGCGCAC GGGAGGGCAC GTCATCAAGA ACGTCGCGGG CTACGACCTC
GCCAAACTTC TGCACGGCTC CTACGGCACG TTGGGGCTCC TCGCCGAGGT GGTGCTCCGC
TTGCACCCGA TCCCCACGGC GACCCGCACG GTGCGCGTGG AACTGCCCCT GTCCGACGCC
GCCCGGAAAG CCGCGTCGGT GCTGCGCGGA CAGCGCGAAC CCGTGTCGCT GGAGTGGTTC
GACGGCCAGC TCGTGGTCCG GTTCGAAGGG ACCGTGGAAG GCACCCGGAC GCGAGCCCGA
CAACTCGCGG CCGAACTCGG TGGCACCGTG CTCGACGAGG ACACGGCCGC CGCGACCTGG
GCACGTCACG CCGAACTGGT ACGGCAAGCC ACCGTCAGGC TCGGGATACG GCCCAGCAGG
CTCGTCGACG TACTCACCGA ATGCGGCTGC GCCGACGGCG CCCGCGCCAC CGTCGGTCTC
GGTACCGGCG TGGCGACCGT GACCGTCTCC GACTCCGACG TCGAACGAGT ACACGACATC
ACCACCGCGG CGGGTGGGGT GTCCGTACTC CGACGCGCGG TCCCCGGTGC TCGCGCGTGG
GGCCAGACCC CCTCGGCGGT CCGAGTGCTG CGGGCGGTGA AGAACGAACT CGACCCGAAC
CGTCGACTGT GTCCCGGACG CCTCGATTCG TGGCTGGAAG AGCGAAAGGC AAAATCGTGA
 
Protein sequence
MTAATSTPST PPTVLAPADL REAHEALADT HGPVDIRGSG TATHWADPPR PATTVLDTTR 
MTGVLTYNPA DMTVSVRAGT PLRELAAELA PNGQRVAFDP ARVEQGATIG GLIATADSGP
LSLTYGSLRD LVIGATVVLA DGTVARTGGH VIKNVAGYDL AKLLHGSYGT LGLLAEVVLR
LHPIPTATRT VRVELPLSDA ARKAASVLRG QREPVSLEWF DGQLVVRFEG TVEGTRTRAR
QLAAELGGTV LDEDTAAATW ARHAELVRQA TVRLGIRPSR LVDVLTECGC ADGARATVGL
GTGVATVTVS DSDVERVHDI TTAAGGVSVL RRAVPGARAW GQTPSAVRVL RAVKNELDPN
RRLCPGRLDS WLEERKAKS