Gene Svir_02230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02230 
Symbol 
ID8385561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp224084 
End bp225046 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID644974324 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003132132 
Protein GI257054300 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAT GTCACTACCC ACACATCCGC CGAAGGAGCA CGGTACGAAC CGTGCGAACA 
GTACTGACAG CCCGAGGGGT GAGTCACCGC TACGGCGGGA CGGTGGCCCT CGACGGTGTG
GACCTCACCG TCGAAACGGG CGAGTGCGTG GCGCTGCTCG GTCCCAACGG CGCCGGGAAG
ACGACGCTGG TGAACCTGGC CGTGGGACTC CTTCCCCGGC AACGCGGTGG GATCAGCCTG
GTCGGTGGTG ATCCGAGGAG CGCCCGCACA CGACGTCACC TGGGAGTCGT GCAACAGTCA
CTGGGTTTCC CAGGGACGCT CAAGGTCGGT GAACTGATCG CCGGCGCGGC CGTTCGTGGG
GGGCGGCCGC GCTCGAACGC GGCACCGATC ATGGCGGAAC TGGGACTCAC CGACCTCGCC
GAACGCCGCG CCGCGAAGTT GTCCGGAGGG CAGCGACAAC GGGTGCAGCT CGCCATGGCG
CTGGTGACCG ACCCGACGCT GCTGGTGTTG GACGAGCCGA CGGTCGGACT CGACGCACCC
ACCCGCAGAC AGCTGTGGCG GATCCTCGAA CGTCGGCGCG AGAAAGGCGC GGGGATACTG
TTGACCACCC ACTTGATCGA CGAGGCGGCG ACGGTCTCGG ACCGGGTCGT GGTGTTGGCG
CACGGCCGAA CGCTGGCCTC GGCGGCCCCG GCGGAGTTGG TCTCCCGACT GCCGGATCGC
ACGATCACCG CCCGCACCGA CCTCGACGAC GAGCGACTCA CCGCACTGCC CGAAGTGGCC
TCGTTCGAAC GGGAGGGTGA GCTCGTCCGG ATCGGCACAC GACACCCCGA ACGGCTGTTA
CGAGCACTGC TCGCCGAGGA CCCGGCGCTG ACCGGGCTCC GGGTCGAGGG AGCGGGTTTG
GAGGAGGCCG TCGTGGCATT GACCACGCGA CCGCGCGACG CGAATCGGGG GCGGGTCCGA
TGA
 
Protein sequence
MTRCHYPHIR RRSTVRTVRT VLTARGVSHR YGGTVALDGV DLTVETGECV ALLGPNGAGK 
TTLVNLAVGL LPRQRGGISL VGGDPRSART RRHLGVVQQS LGFPGTLKVG ELIAGAAVRG
GRPRSNAAPI MAELGLTDLA ERRAAKLSGG QRQRVQLAMA LVTDPTLLVL DEPTVGLDAP
TRRQLWRILE RRREKGAGIL LTTHLIDEAA TVSDRVVVLA HGRTLASAAP AELVSRLPDR
TITARTDLDD ERLTALPEVA SFEREGELVR IGTRHPERLL RALLAEDPAL TGLRVEGAGL
EEAVVALTTR PRDANRGRVR