Gene Svir_02050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02050 
Symbol 
ID8385543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp208550 
End bp209155 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content69% 
IMG OID644974306 
Productpredicted transcriptional regulator 
Protein accessionYP_003132114 
Protein GI257054282 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGCG ACACGAACGA CGTGCTTGCC GCGGTGGGGC CGCGACTTCG CGCGCTGCGT 
CGGCACCGTG GCATCACCCT CGCCGAGCTC GCGACGGCGA CCGGGGTGTC GGAGAGTACG 
CTGTCTCGGC TGGAGAGCGG ACAGCGCCGC GCGACCCTGG AGTTGCTGCT CCCGCTCGCC 
CGCGTCTACA ACGTTCCACT GGACGACCTC GTCGGCGCGC CGCGCACCGG CGACCCTCGC 
GTCCACCTCA CGCCGATCCA CCGGTTCGGG ATGACCTTCG TGCCGCTGTC CCGGCGACCC 
GGCGGGGTAC AGGCGTTCAA GATGATCATT CCGGCCCGGC CCGAACCCGC CGAGCCGACC 
CCGCAGACCC ACGACGGCTT CGAATGGTTG TACGTCCTCA ACGGACGCCT ACGACTGGTC 
CTCGGAGAAC GCGACCTGAC ATTGCAACCC GGCGAGGCAG CCGAGTTCGA CACGTCCTTG 
CCGCACTGGC TGGGCAGCGC CGACGGCGGC GTGGTCGAGT TACTCATCCT GTTCGACCCC 
CAAGGGGTAC GCACACACAT CCACACCGCT CCACACCGAC CGCCTCACGG CGAAAGTCGA 
CGGTAG
 
Protein sequence
MDRDTNDVLA AVGPRLRALR RHRGITLAEL ATATGVSEST LSRLESGQRR ATLELLLPLA 
RVYNVPLDDL VGAPRTGDPR VHLTPIHRFG MTFVPLSRRP GGVQAFKMII PARPEPAEPT 
PQTHDGFEWL YVLNGRLRLV LGERDLTLQP GEAAEFDTSL PHWLGSADGG VVELLILFDP 
QGVRTHIHTA PHRPPHGESR R