Gene Svir_02040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02040 
Symbol 
ID8385542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp207835 
End bp208461 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID644974305 
Productmethyltransferase family protein 
Protein accessionYP_003132113 
Protein GI257054281 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0500] SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCA CCGATGCGGT CACCTTCTGG GACGACGTCC ACGCGTCCCG GCCGGCGACC 
ACCGGCCCAC GGCCGAACGT CCGACTCACC GAGATCGTCA CCGGCCTGCC GCCCGGCGAC
GCGTTGGACC TCGGCTGCGG TAACGGCGGT GATGCGCTGT GGCTCGCCGG TCAGGGCTGG
CACGTCACCG CCGTCGACAT CTCGACCGTG GCTGTCGAGC GGCTCACCGC CCTCGCCGCA
TCAGGTGACC TCGCCGACCG TGTCACCGCC GTACGGTGCG ACCTGGGGGA GAGCTTCCCT
GCCGGCGAGT TCGACCTGAT CTGCGCCCAT TACCTGCACA CCCCCTTCGA CCTGGACCGG
GCGACCGTCC TGCGCTCGGC CGCGCACGCG TTGCGCACGG GCGGTCGGCT GCTGGTCGTC
GACCACGGCT CGACGGCGCC GTGGTCGTGG AACCAGGATC CCGACGTCCG GTTCCCGAGC
CCGCAGGAGG TCGCCGAGGA CATCGGCCTG GACTGGACGA AGTGGACGAT CGAACGAGCC
GAGGCACCCC GCAGGATCGC GACAGGACCG AACGGCCACA CCGCCGAGGT CATCGACCAC
GTCCTCCTCA TCCGCCGCAC CGTCTGA
 
Protein sequence
MHTTDAVTFW DDVHASRPAT TGPRPNVRLT EIVTGLPPGD ALDLGCGNGG DALWLAGQGW 
HVTAVDISTV AVERLTALAA SGDLADRVTA VRCDLGESFP AGEFDLICAH YLHTPFDLDR
ATVLRSAAHA LRTGGRLLVV DHGSTAPWSW NQDPDVRFPS PQEVAEDIGL DWTKWTIERA
EAPRRIATGP NGHTAEVIDH VLLIRRTV