Gene Svir_01800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01800 
Symbol 
ID8385518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp188429 
End bp188947 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID644974284 
Producthypothetical protein 
Protein accessionYP_003132094 
Protein GI257054262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.612102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCACT ATGGCCTCCA CGCTGACTAC TGTGGGTGGG AAACGTTGAA CGGTCGGCAG 
AACACCGAGG TGACAGTGAC CGAGACCAAG CCGCCGACGA GCCCGACGAG CACGAGTGTG
GGCGCGCAGG ACGACATCGA ACTCCGGCTC GGCGCGAGCC TGGTGCATCT ACCGATCATC
CGGTCGGTCG CGGCGAGTAT CGCGATGAGG GCCGACTTCG ATCTCGACTC GATCGCCGAT
CTGCGATTGG CGGTGGACGA GGCATGCTCC ACGCTCATCA CCCGCGCTCT TCCGGACAGC
ACCATGACCT GTCGGTTCAC GATCGACGAG GACCAACTGC TGTTCCGAGG CACCGTCCTC
TCGACCGAGA CGGAGGCGCC CAGCACCACC TCGTTCGGCT GGCGGGTACT CACCACGCTC
GCGGACGCGG CCTCCGCGTG GACGGAGCAG CACCCGGAGA ACGGGCAGCG CAACTGGATT
CACATCGAGC TTGCGAAACG GAAGCCGGCT TTTACGTGA
 
Protein sequence
MVHYGLHADY CGWETLNGRQ NTEVTVTETK PPTSPTSTSV GAQDDIELRL GASLVHLPII 
RSVAASIAMR ADFDLDSIAD LRLAVDEACS TLITRALPDS TMTCRFTIDE DQLLFRGTVL
STETEAPSTT SFGWRVLTTL ADAASAWTEQ HPENGQRNWI HIELAKRKPA FT