Gene Svir_01670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01670 
Symbol 
ID8385505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp177318 
End bp177788 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID644974271 
Productrrf2 family protein, putative transcriptional regulator 
Protein accessionYP_003132081 
Protein GI257054249 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.207254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCG GACAAGCGGT TGAGTGGATG CTGCACACAT GCCTGAACTT GTCCTGGGTC 
GATGAGCCGG TGTCGACCGC GCGACTCGCG GACATCTATC GGTTGCCGTC CGCGTATTTG
AACAAACAGC TCCAGGCGCT GGCGCGGGAG AAGATCCTGG TCTCGGTTCC CGGGGCGCGG
GGTGGTTTCA GGCTCGCGCG TGATCCGGCC GAGATCTCTT TGCTGGACGT CGTGGTGGCG
GTGGAGGGCA AAGCGGAGGC CTTCCGCTGC GCCCAGATCC TTCGCAACGG GCCGGGTGGT
GACCCGGACG TCGACTACAG CTCCTACTGC GTGGTGTCGC AGAGCATGCG GCGTGCCGAG
TTGGCGTGGC GGCGCGAGCT CGCCGGTCGG ACGATCGCCG ACATCGCCGC CGACGTGGTT
CGGCGCAATC CGGACGCGCC GGAGCTCGTT CGGGACGCCT TGACGAATTG A
 
Protein sequence
MRLGQAVEWM LHTCLNLSWV DEPVSTARLA DIYRLPSAYL NKQLQALARE KILVSVPGAR 
GGFRLARDPA EISLLDVVVA VEGKAEAFRC AQILRNGPGG DPDVDYSSYC VVSQSMRRAE
LAWRRELAGR TIADIAADVV RRNPDAPELV RDALTN