| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01570 |
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| Symbol | |
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| ID | 8385495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 168198 |
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| End bp | 169181 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644974261 |
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| Product | predicted nucleoside-diphosphate sugar epimerase |
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| Protein accession | YP_003132072 |
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| Protein GI | 257054240 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0782999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC TCGACGGGTC CAGCATTCTG CTCACTGGGG GGACGGGCTC GTTCGGGAAA
GCGTTCATCA GCTACGCGCT CGCCGAGTTG AACCCCCGCA GGCTGGTGGT GCTCTCTCGC
GACGAACTCA AGCAGTACGA GGTGCGGCAA CAGTTCGACG ACGACCCTCG GCTGCGCTGG
TTCATCGGCG ACGTCCGGGA CCGTCGCAGG CTGGAACGCG CCATGCACGG CGTCGACTAC
GTGGTCCACG CCGCCGCGTT GAAACAAGTG GACACCGGCG AGTACAACCC GTTCGAATTC
GTCCAGACCA ACGTGGTGGG TTCGCAGAAC GTCATCGAGG CCGCCATCGA CAGCGGCGTG
AAGAAGGTCG TGGCACTGTC CACCGACAAG GCGTCGAGCC CGATCAACCT CTACGGCGCC
ACGAAACTGT GCGCCGACCG GATGTTCATC AGCGCCAACC ACTACGCGGC CGCGCATCCG
ACCCGATTCG CCGTGGTCCG GTACGGCAAC GTGATGGCCT CACGGGGCAG CGTGATCCCG
TTGTTCCGGT CGCTGGCCGA GCAGGGTAAG TCGCTGCCGA TCACGCACAA GGAGATGACG
CGGTTCTGGA TCACCCTGCC GCAGGCGGTG CGGTTCGTCG TGGAGTCGTT CGACCTCATG
CGCGGCGGTG AGCTGTACGT GCCCCGCATC CCGAGCATGC GGTTGGTGGA CCTGGCGCAG
GCCATCGCCC CGGGCAGCCC CATGCACGAG GTCGGCATCC GCCCCGGCGA GAAACTGCAC
GAGGAGATGA TCGCCCCGGA CGACTCACGT CGCACCGTTC GGCTCGGCGA CCGCTACATC
GTGCAGCCCC ACATCGCGGG ATGGGGCTAC GAACCACCCG AGGAGGGAAC CCCGGTGCCC
GAGGGTTTCT CCTACCGATC CGACACCAAC GACCTGTGGC TGTCCACCGA CGACATCAAG
AAACTGATCG CCGAACATGA GTGA
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| Protein sequence | MAELDGSSIL LTGGTGSFGK AFISYALAEL NPRRLVVLSR DELKQYEVRQ QFDDDPRLRW
FIGDVRDRRR LERAMHGVDY VVHAAALKQV DTGEYNPFEF VQTNVVGSQN VIEAAIDSGV
KKVVALSTDK ASSPINLYGA TKLCADRMFI SANHYAAAHP TRFAVVRYGN VMASRGSVIP
LFRSLAEQGK SLPITHKEMT RFWITLPQAV RFVVESFDLM RGGELYVPRI PSMRLVDLAQ
AIAPGSPMHE VGIRPGEKLH EEMIAPDDSR RTVRLGDRYI VQPHIAGWGY EPPEEGTPVP
EGFSYRSDTN DLWLSTDDIK KLIAEHE
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