| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01560 |
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| Symbol | |
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| ID | 8385494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 167069 |
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| End bp | 168205 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974260 |
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| Product | predicted PLP-dependent enzyme possibly involved in cell wall biogenesis |
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| Protein accession | YP_003132071 |
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| Protein GI | 257054239 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0520008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT TCCTGCCGTA CGGGCGCCAA TCGGTCAACG ACGACGACAT CGCCGCGGTC
GCCGAGGTGC TGCGCGGCGA CTGGCTGACC ACCGGCCCCG CCGTGACACG CTTCGAAGCC
GATCTGGCCG AACACACGGG TGGCACCCCC GCCGTGGCGG TGACCTCGGG GACCGCCGCA
TTGCACGTCG CCTACGCCGC CGCGGGCATC GGCCCCGGCG ACGAGGTGGT GACCACTCCC
CTGACGTTCG TGGCCACGGC CGCCACGGCG GCCCTGCACG GCGCCAAGGT CGTGTTCGCC
GACGTCGAAC CCGACACCGG CAACCTCGAC CCGGCCGCGG CCCACGCGGC GGTCACCGAC
CGCACCAAGG TCCTCGCGGC CGTGGACTAC GCCGGACATC CGGCCGAACT GGACCAATTG
CGCAAGGTCG CCGATTCGGT GGGCGCACTG TTGTTGGAGG ACGCCGCCCA TTCCCTCGGT
AGTTCGTGGC GTGGCCGACC CGTGGGATCG CTGGCCGACC TCACCACGTT CTCGTTCTTC
GCCACGAAGA ACCTCACCAC CGCCGAGGGC GGCGCGGTGG TGAGCCCGTC GGCCGAGCTG
GTGGAACGGG CCCGGGCGTT CCGCAACCAC GGGCTGGTGC GCGACCGCGC CCGGCAGCGC
TACCCCGACG AGGGCGGCTG GCATCAGGAG GTGCACGCCT TCGGCCTGAA CTACCGGTTG
CCGGACGTGC TGTGCGCGTT GGGCAGCAGC CAGTTGCGCA GGCTTTGGGC GTTCAAACAG
CGTCGCGCCG AGATCCACGC GCGTTACGAC GAGGGGCTTC GTGACGTACC GGGCGTGTTG
ACGCCGGTGT GTCGGGCCGA GGCCGACCCG ATGTGGCATC TCTACCCGCT GCGGGTGCTG
GACGGCAGGC GGCGCGCGTT GTTCGACCAC CTGCGCGCGA ACGGTATCGG CGTGCAGGTG
AACTACATCC CCGCCTACTG GCACCCGGTG TTCGAGGACC TCGGCTACCG CCGTGGCCTG
TGCCCGAACG CCGAGGCCTA CTACGCCCAG GAACTGTCGT TGCCACTGTT CGCCGACCTC
AGCGACGCCG ACGTCGACCG CGTCATCGAC ACCGTGCGGT CGTTCTTCGG CGTGTGA
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| Protein sequence | MSDFLPYGRQ SVNDDDIAAV AEVLRGDWLT TGPAVTRFEA DLAEHTGGTP AVAVTSGTAA
LHVAYAAAGI GPGDEVVTTP LTFVATAATA ALHGAKVVFA DVEPDTGNLD PAAAHAAVTD
RTKVLAAVDY AGHPAELDQL RKVADSVGAL LLEDAAHSLG SSWRGRPVGS LADLTTFSFF
ATKNLTTAEG GAVVSPSAEL VERARAFRNH GLVRDRARQR YPDEGGWHQE VHAFGLNYRL
PDVLCALGSS QLRRLWAFKQ RRAEIHARYD EGLRDVPGVL TPVCRAEADP MWHLYPLRVL
DGRRRALFDH LRANGIGVQV NYIPAYWHPV FEDLGYRRGL CPNAEAYYAQ ELSLPLFADL
SDADVDRVID TVRSFFGV
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