Gene Svir_01540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01540 
Symbol 
ID8385492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp165465 
End bp165986 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID644974258 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003132069 
Protein GI257054237 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0257601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTC CCGCGACCGA CGGTGACGTG GAGACCATCC GTCGTTGGCG TAACCATCCG 
AAGGTCCGCC GGGCCAGCTT CACCACGCAC GAGATCGGGC CGGAGGAGCA TCGCGCGTGG
TGGGAGGCCG TCAGCGCCGA CCCGACGAGA CGGGTGTTGA TCTTCGAACG GAACGGCGTC
CCCTCGGGTG TCGTGCTGTT CACCGGCGTG GGCTCCGAAC TCGTCGAGTG GAGCAAGTAC
GTCGACGTCG ACGGTCTGGG TTCGGAACGG GCGGCCGCCT GGGAGGAGCT GGAGTACGAG
GCCATCGACT ACGCCTTCGA CGTGCTCGGC GCCGACCGGA TCGGGGCGTC GACGCTGGCC
GCGAACACAC CGGTGCGCCG CCTCCATGAG CGCACCGGTT TCGTCGAACT GCGTCGCTAC
ACCAGGACCA TCGACGGTGT CGACCGCGAG GTCGTGTGGA GTGAACTGTC CGCGCGCGCA
TGGAAGGCGA GGCGGACGAG GAGGGAGACG GCCGGTGAGT GA
 
Protein sequence
MLRPATDGDV ETIRRWRNHP KVRRASFTTH EIGPEEHRAW WEAVSADPTR RVLIFERNGV 
PSGVVLFTGV GSELVEWSKY VDVDGLGSER AAAWEELEYE AIDYAFDVLG ADRIGASTLA
ANTPVRRLHE RTGFVELRRY TRTIDGVDRE VVWSELSARA WKARRTRRET AGE