Gene Svir_01470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01470 
Symbol 
ID8385485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp159843 
End bp160781 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content73% 
IMG OID644974251 
Producthypothetical protein 
Protein accessionYP_003132062 
Protein GI257054230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0279964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC CCATCCCCTT CGACTTGGAG AAGGAGATGG AAAGCTGGGG TTCGAACCCT 
CTCACCACCA TCGAGCAGAT TTCCAAGACC TTCGAAAAGT GGGAGGAAAG CCGGGCCGCG
CACGAGCAGG CCGCGGAGGT CATGCACCGC TACGACGCGG AGCTGCAGGA AGCCGGCAAC
AAGCAGCCCG TGTTCGCTGA GCCCCCGTCG TTCGGCGGTG GGAGCGCGGA GAGCAGCGTC
AAGCCCAGCG GGGTGATCCA GGTTCCGGAC ACCTCTGCTA CCGGCGGCGG CACCAAGGCC
TCAGGGTATG CCGGTGTGCC CGGAGGGTCG GTTTCTCCTT CGACCGGTGG TGGAGGCTAC
GGCGGTGGTG GCCTCGGTGC TCCCTCCCCG ACTCCGCCGC CGGGGGGTGG GCCTTCCACC
GGGGCCGGTG TGGTGCCGCC GGTGACACGA CCCTCCGGGT TGAACCCCGG TGGTGGCATG
ACCCGGCCAC CAGCCGGCGG GCGTGGTTCC CAGCGCAGCG GGTTCGGTCC CGGCGGCATG
GGTGCGGTCC CGGCCGCGGG CCTGGCAGGC GGATTCGGTC CCGGCGGCGG TGGCGGCGGT
GGAAGCTACG GCGGCGGCCG GGTCCCGGGC GCCGGGTTCG GGCCCGGCGG CGGTGCTGGC
GGAGCCGGTG GTGCTGGGGC TGGTTCGGGC GCGGCCACCG GGGCCAGGCC GATGGGCGGT
CCCGCAGCGG CAGGGCCCGG CGCGGCAGCG GCGGCTGCCG GTGCGGCCGG CCGTGGTGGC
ATGGGGGCGG CTCCCATGGG GGCCGGAGCC GGTGCCGGTA AGGGCGGCCA AGGCGGAGAG
GACAACGAAC ACCAACGTCC CACCTACCTG GTCGAAGCCG ACCCCGACGA CGTCTTCGGC
ACCGACCAAC GCACCGCACC ACCCGTCATC GGCGCCTGA
 
Protein sequence
MPEPIPFDLE KEMESWGSNP LTTIEQISKT FEKWEESRAA HEQAAEVMHR YDAELQEAGN 
KQPVFAEPPS FGGGSAESSV KPSGVIQVPD TSATGGGTKA SGYAGVPGGS VSPSTGGGGY
GGGGLGAPSP TPPPGGGPST GAGVVPPVTR PSGLNPGGGM TRPPAGGRGS QRSGFGPGGM
GAVPAAGLAG GFGPGGGGGG GSYGGGRVPG AGFGPGGGAG GAGGAGAGSG AATGARPMGG
PAAAGPGAAA AAAGAAGRGG MGAAPMGAGA GAGKGGQGGE DNEHQRPTYL VEADPDDVFG
TDQRTAPPVI GA