Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01430 |
Symbol | |
ID | 8385481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 155333 |
End bp | 156118 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974247 |
Product | hypothetical protein |
Protein accession | YP_003132058 |
Protein GI | 257054226 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0268047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCAAT CGTTTTCGTT GTCGTTGGCC GCGATCGACA TCCTGTTCGA GCACCTGAGG CTGGGGCATG CGCCGTTCCC GTTCGAGGTG CCGCATCTGG GGCAGACGTT CACCGAGCGG TCGCAGATCA GGCAGGCGGT GTTCCGGGAT CTGGAGAGCC GGGACCTCAT GCGTGGCGGC AGGGTGGACG CCGACGTGGA GGCGGCGCTG GTGACGTTCG CGCGGGGTCC GGTGGCGATC ACGGCGGCGG CGAAGTTGGA GAAGGGCGAG AAGCTGTTCG CCCGTTCGGC GGTGGACGGG CAGCTGGCGG TGTTGGCGAA GCGGGACGGC AATCTCATCG TGTTCAACGA GATCCGGCCG GTCGGGTTGG TGCCGGAGAT CGTGAACCTG ATTCCGTCGA CGCGGCCGGC GCCGGGACAG TCGGTGACGG TCGCGCAGCC GCAGCCGCAG CAGGACCGGG GCAGGCATGC GGCGCCGGAT TCGTACGACC CGTTCGCGGG GGTGTCGGCT CCGACGTCGA GGCGGGACCC GCAGTTGCGG ATGGTGGAGC GGATGTTCAC CAAGCCGCAG TTGCGGATGG GCCAGTTCAC GGCGTTCGCG CAGGGCGGCG GTGGCAAGTC GCGGCATCTG GACCCGGTGG CGTGGTTCGA CAGTGAGGAC GGACGGATCT TCACCACGAG TCGCACGGCC GAGGACGGGC AGAGGTGGTT GACGTACGCG CCGGCGGACA ACGCGCGTAT CGTCCAGCAT TTGTCGTCGC AGGTACAGCC GTTCCTGCAA CGGTGA
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Protein sequence | MVQSFSLSLA AIDILFEHLR LGHAPFPFEV PHLGQTFTER SQIRQAVFRD LESRDLMRGG RVDADVEAAL VTFARGPVAI TAAAKLEKGE KLFARSAVDG QLAVLAKRDG NLIVFNEIRP VGLVPEIVNL IPSTRPAPGQ SVTVAQPQPQ QDRGRHAAPD SYDPFAGVSA PTSRRDPQLR MVERMFTKPQ LRMGQFTAFA QGGGGKSRHL DPVAWFDSED GRIFTTSRTA EDGQRWLTYA PADNARIVQH LSSQVQPFLQ R
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